RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ACOT2P49753 483 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 MRPL58Q14197 206 aaKnown RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 SLC39A14Q15043 492 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ZBTB6Q15916 424 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ADALQ6DHV7 355 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 JADE1Q6IE81 842 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 PARM1Q6UWI2 310 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 CCDC73Q6ZRK6 1079 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 RTL10Q7L3V2 364 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 SLC44A3Q8N4M1 653 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 BEST2Q8NFU1 509 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ZNF461Q8TAF7 563 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ITFG1Q8TB96 612 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ING5Q8WYH8 240 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 FGF13Q92913 245 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 MRPL44Q9H9J2 332 aaKnown RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 FAM86C1Q9NVL1 165 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TBC1D7Q9P0N9 293 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 CPSF3Q9UKF6 684 aaKnown RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TIMM13Q9Y5L4 95 aaPredicted RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ZFP37Q9Y6Q3 630 aaPredicted RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TCHHQ07283 1943 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TRIOO75962 3097 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ZDBF2Q9HCK1 2354 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 A0A087X0B3 334 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ARHGEF37A1IGU5 675 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 H0Y858 1186 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 M0QZQ0 153 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 PPEF2O14830 753 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ABLIM3O94929 683 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 GCNT3O95395 438 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 SEC24AO95486 1093 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 RHOP08100 348 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 NFICP08651 508 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 IDEP14735 1019 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ATF2P15336 505 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 NPR3P17342 541 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 GAP43P17677 238 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 CLCN5P51795 746 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 NUBP1P53384 320 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 YWHAHQ04917 246 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ADCY1Q08828 1119 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 TMEM132DQ14C87 1099 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 SPATA1Q5VX52 437 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 SLFN12LQ6IEE8 588 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 MTSS1LQ765P7 747 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 USP37Q86T82 979 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 CD302Q8IX05 232 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 PDILTQ8N807 584 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 GPR152Q8TDT2 470 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 POMGNT1Q8WZA1 660 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ATOH1Q92858 354 aaPredicted RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 FGF14Q92915 247 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 HVCN1Q96D96 273 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 RPP25Q9BUL9 199 aaKnown RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 IKZF4Q9H2S9 585 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 ST6GALNAC4Q9H4F1 302 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 WNT16Q9UBV4 365 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 AFF4Q9UHB7 1163 aaKnown RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 AGO2Q9UKV8 859 aaKnown RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 KCNH3Q9ULD8 1083 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 MRPS23Q9Y3D9 190 aaKnown RBP9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 INSL5Q9Y5Q6 135 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 TSC2P49815 1807 aa9.26□□□□□ -0.93
SFSWAP-202ENST00000535202 KRBA1A5PL33 1030 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 PI15O43692 258 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 PPP1R37O75864 691 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 ADRB2P07550 413 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 OR4Q2P0C623 313 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 CEBPBP17676 345 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 PTPN2P17706 415 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 AOC1P19801 751 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 AARSP49588 968 aaKnown RBP eCLIP9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 TWF1Q12792 350 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 SLC5A9Q2M3M2 681 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 C9orf57Q5W0N0 161 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 TPGS2Q68CL5 300 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 RNF19BQ6ZMZ0 732 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 TCEAL8Q8IYN2 117 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 ELMOD1Q8N336 334 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 LINC00301Q8NCQ3 95 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 MCRS1Q96EZ8 462 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 ZNF396Q96N95 335 aaPredicted RBP9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 PGLYRP2Q96PD5 576 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 TSPAN18Q96SJ8 248 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 KXD1Q9BQD3 176 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 RTP3Q9BQQ7 232 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 CORO1BQ9BR76 489 aa9.25□□□□□ -0.93
SFSWAP-202ENST00000535202 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms