RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ABLIM3O94929 683 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 TYMPP19971 482 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 SURF1Q15526 300 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 ELMSAN1Q6PJG2 1045 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 XXYLT1Q8NBI6 393 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 ZNF707Q96C28 371 aaPredicted RBP23.1■■□□□ 1.29
PKP3-211ENST00000534401 RIPOR3Q96MK2 946 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 APOL5Q9BWW9 433 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 CDH22Q9UJ99 828 aa23.1■■□□□ 1.29
PKP3-211ENST00000534401 CLIC2O15247 247 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 ZMYND10O75800 440 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 CYP11A1P05108 521 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 POU2F2P09086 479 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 MYBPC2Q14324 1141 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 ATAT1Q5SQI0 421 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 GLYCTKQ8IVS8 523 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 C1orf127Q8N9H9 656 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 CACTINQ8WUQ7 758 aaKnown RBP23.09■■□□□ 1.29
PKP3-211ENST00000534401 CCDC34Q96HJ3 373 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 SENP8Q96LD8 212 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 MFSD14AQ96MC6 490 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 OXCT2Q9BYC2 517 aaPredicted RBP23.09■■□□□ 1.29
PKP3-211ENST00000534401 GZF1Q9H116 711 aaPredicted RBP23.09■■□□□ 1.29
PKP3-211ENST00000534401 POMKQ9H5K3 350 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 INTS13Q9NVM9 706 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 FBXL5Q9UKA1 691 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 TRAF3IP3Q9Y228 551 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 CDY1Q9Y6F8 540 aa23.09■■□□□ 1.29
PKP3-211ENST00000534401 TSC2P49815 1807 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 SPATA31D3P0C874 917 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 HOXA9P31269 272 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 PSMD6Q15008 389 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 SNRNP35Q16560 246 aaKnown RBP23.08■■□□□ 1.29
PKP3-211ENST00000534401 NFIL3Q16649 462 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 UVSSAQ2YD98 709 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 TMC5Q6UXY8 1006 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 SPATA31D4Q6ZUB0 917 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 GUF1Q8N442 669 aaKnown RBP23.08■■□□□ 1.29
PKP3-211ENST00000534401 ZNF461Q8TAF7 563 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 CCDC47Q96A33 483 aaKnown RBP23.08■■□□□ 1.29
PKP3-211ENST00000534401 SIX4Q9UIU6 781 aa23.08■■□□□ 1.29
PKP3-211ENST00000534401 PTPRJQ12913 1337 aa23.08■■□□□ 1.28
PKP3-211ENST00000534401 GADD45BO75293 160 aaPredicted RBP23.07■■□□□ 1.28
PKP3-211ENST00000534401 RFPL2O75678 378 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 MCCD1P59942 119 aaPredicted RBP23.07■■□□□ 1.28
PKP3-211ENST00000534401 ROR1Q01973 937 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 CYP24A1Q07973 514 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 PNOCQ13519 176 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 COBLL1Q53SF7 1204 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 CLEC17AQ6ZS10 378 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 LRRC52Q8N7C0 313 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 GSDMAQ96QA5 445 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 PRKD2Q9BZL6 878 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 ITGA11Q9UKX5 1188 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 MAFFQ9ULX9 164 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 DOCK8Q8NF50 2099 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 MYO10Q9HD67 2058 aa23.07■■□□□ 1.28
PKP3-211ENST00000534401 CCDC195A0A1B0GUA6 201 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 KIF20AO95235 890 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 HNRNPA1P09651 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
PKP3-211ENST00000534401 PNPLA4P41247 253 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 TAF6P49848 677 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 CYP2J2P51589 502 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 TFAMQ00059 246 aaKnown RBP23.06■■□□□ 1.28
PKP3-211ENST00000534401 TPGS2Q68CL5 300 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 SCARA3Q6AZY7 606 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 ZNF280DQ6N043 979 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 WDR49Q8IV35 697 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 OR5B17Q8NGF7 314 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 KHSRPQ92945 711 aaKnown RBP eCLIP23.06■■□□□ 1.28
PKP3-211ENST00000534401 NOTCH4Q99466 2003 aa23.06■■□□□ 1.28
PKP3-211ENST00000534401 WDR27A2RRH5 827 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 ATF2P15336 505 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 CLDN10P78369 228 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 YWHAHQ04917 246 aaPredicted RBP23.05■■□□□ 1.28
PKP3-211ENST00000534401 CTXN3Q4LDR2 81 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 ZCWPW2Q504Y3 356 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 DSTYKQ6XUX3 929 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 LIMS2Q7Z4I7 341 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 TCEAL8Q8IYN2 117 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 USTQ9Y2C2 406 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 PCDHA5Q9Y5H7 936 aa23.05■■□□□ 1.28
PKP3-211ENST00000534401 ARHGEF37A1IGU5 675 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 OR6C75A6NL08 312 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 KPNA7A9QM74 516 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 DUOXA2Q1HG44 320 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 PLEKHO2Q8TD55 490 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 FAM84AQ96KN4 292 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 ZNF560Q96MR9 790 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 MTMR12Q9C0I1 747 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 WDR6Q9NNW5 1121 aaKnown RBP23.04■■□□□ 1.28
PKP3-211ENST00000534401 GDAP2Q9NXN4 497 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 AGAP1Q9UPQ3 857 aa23.04■■□□□ 1.28
PKP3-211ENST00000534401 TIMM13Q9Y5L4 95 aaPredicted RBP23.04■■□□□ 1.28
PKP3-211ENST00000534401 PI4K2BG5E9Z4 385 aa23.03■■□□□ 1.28
PKP3-211ENST00000534401 MAPK13O15264 365 aa23.03■■□□□ 1.28
PKP3-211ENST00000534401 ITGB3P05106 788 aa23.03■■□□□ 1.28
PKP3-211ENST00000534401 ODC1P11926 461 aa23.03■■□□□ 1.28
PKP3-211ENST00000534401 POLR2BP30876 1174 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms