RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 ADPGKQ9BRR6 497 aa13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 STRA6Q9BX79 667 aa13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 CXCL16Q9H2A7 254 aa13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRDL2-209ENST00000534276 CCDC195A0A1B0GUA6 201 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 RFPL2O75678 378 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 SPATA31D3P0C874 917 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 MYBP10242 640 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 RPL13P26373 211 aaKnown RBP13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 EFNA5P52803 228 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 SPATA31D4Q6ZUB0 917 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 VSTM4Q8IW00 320 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 NAP1L5Q96NT1 182 aaPredicted RBP13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRDL2-209ENST00000534276 CASTOR2A6NHX0 329 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 H0YCG3 227 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 PPP1R37O75864 691 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 KIF4AO95239 1232 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 PAPLNO95428 1278 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 THP07101 528 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 RPL17P18621 184 aaKnown RBP13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 PTPN5P54829 565 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 CREMQ03060 361 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 TCF15Q12870 199 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 KRT31Q15323 416 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 NAB2Q15742 525 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 DCAF4L1Q3SXM0 396 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 ATF7IP2Q5U623 682 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 PLEKHA4Q9H4M7 779 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 TMEM206Q9H813 350 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
CHRDL2-209ENST00000534276 A0A1W2PQC6 194 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 K7ERI5 159 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 CETN3O15182 167 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 TGM5O43548 720 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 GCNT3O95395 438 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 SMTNP53814 917 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 RTP2Q5QGT7 225 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 FAM171A1Q5VUB5 890 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 GLYCTKQ8IVS8 523 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 HASPINQ8TF76 798 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 SMG7Q92540 1137 aaKnown RBP13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 ZNF707Q96C28 371 aaPredicted RBP13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 IQCDQ96DY2 449 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 TBC1D7Q9P0N9 293 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC169A6NNP5 214 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 PBX1P40424 430 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 NPTX2P47972 431 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 PEX3P56589 373 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 GTF2BQ00403 316 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 PPP2R3AQ06190 1150 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 TDGQ13569 410 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 APBB1IPQ7Z5R6 666 aaPredicted RBP13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 ZSCAN30Q86W11 494 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 SLC9A9Q8IVB4 645 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 C12orf56Q8IXR9 622 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 LNX1Q8TBB1 728 aaPredicted RBP13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 CNOT6LQ96LI5 555 aaKnown RBP13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 ZDHHC7Q9NXF8 308 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 CLUHO75153 1309 aa13.32□□□□□ -0.28
CHRDL2-209ENST00000534276 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 ZMYND10O75800 440 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 GBP2P32456 591 aaPredicted RBP13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 HOXD13P35453 343 aa13.31□□□□□ -0.28
CHRDL2-209ENST00000534276 CASP5P51878 434 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms