RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
RAD50-209ENST00000533482 HAUS2Q9NVX0 235 aa13.11□□□□□ -0.31
RAD50-209ENST00000533482 CCDC78A2IDD5 438 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 CST8O60676 142 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 GNAT1P11488 350 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 DSG3P32926 999 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 SLC1A1P43005 524 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 KCNV1Q6PIU1 500 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 RUBCNQ92622 972 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 SEMA4AQ9H3S1 761 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 ZNF263O14978 683 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 APRTP07741 180 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 TRADDQ15628 312 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 ICE2Q659A1 982 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■■■■□ 24.1
RAD50-209ENST00000533482 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 KLHL8Q9P2G9 620 aaPredicted RBP13.1□□□□□ -0.31
RAD50-209ENST00000533482 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 MAP2K7O14733 419 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 P4HA2O15460 535 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 AGTP01019 485 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 ZNF286BP0CG31 522 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 ITIH2P19823 946 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 NCF2P19878 526 aaPredicted RBP13.1□□□□□ -0.31
RAD50-209ENST00000533482 SERPINB6P35237 376 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 IER5Q5VY09 327 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 SH3BP5LQ7L8J4 393 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 KDELC2Q7Z4H8 507 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 IFT122Q9HBG6 1241 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 TXLNGQ9NUQ3 528 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 AFG3L2Q9Y4W6 797 aa13.1□□□□□ -0.31
RAD50-209ENST00000533482 HBP1O60381 514 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 PPP3CAQ08209 521 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 ATXN7L3BQ96GX2 97 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 POLIQ9UNA4 740 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 IRF6O14896 467 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 CDH16O75309 829 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 C4orf19Q8IY42 314 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 ACTRT1Q8TDG2 376 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 KRT35Q92764 455 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 TRIM55Q9BYV6 548 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 RAB6BQ9NRW1 208 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 CHUKO15111 745 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 GJB6O95452 261 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 VGLL4Q14135 290 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 GJC2Q5T442 439 aaPredicted RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 PHLDB3Q6NSJ2 640 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 C1orf186Q6ZWK4 172 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 CYTH2Q99418 400 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 VPS11Q9H270 941 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 A0A087WZ62 844 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 CFAP69A5D8W1 941 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 FAM107AO95990 144 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 GSTA1P08263 222 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 GSTA2P09210 222 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
RAD50-209ENST00000533482 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
RAD50-209ENST00000533482 RBP3P10745 1247 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 RFC5P40937 340 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 MAGEA4P43358 317 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 SESN2P58004 480 aaPredicted RBP13.08□□□□□ -0.32
RAD50-209ENST00000533482 AMPD2Q01433 879 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 ROR1Q01973 937 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 CUL2Q13617 745 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 RPS6KA2Q15349 733 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 CCDC60Q8IWA6 550 aaPredicted RBP13.08□□□□□ -0.32
RAD50-209ENST00000533482 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 AGAP3Q96P47 875 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
RAD50-209ENST00000533482 NIF3L1Q9GZT8 377 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 KCNN4O15554 427 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 NPTXRO95502 500 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 PYGMP11217 842 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 MYL6P60660 151 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 RBP5P82980 135 aa13.08□□□□□ -0.32
RAD50-209ENST00000533482 PPATQ06203 517 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms