RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RBP5P82980 135 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-214ENST00000533209 PAK1Q13153 545 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
SSBP3-214ENST00000533209 PDXDC1Q6P996 788 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 RSPO2Q6UXX9 243 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-214ENST00000533209 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
SSBP3-214ENST00000533209 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 LRRC52Q8N7C0 313 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 SLC22A17Q8WUG5 538 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 HLA-CQ95604 372 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 UBE2ZQ9H832 354 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-214ENST00000533209 COG5Q9UP83 839 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
SSBP3-214ENST00000533209 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 IKBKBO14920 756 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 SLC16A3O15427 465 aaKnown RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 ADAM12O43184 909 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TBX10O75333 385 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CST3P01034 146 aaPredicted RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 ADH1AP07327 375 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 KRT19P08727 400 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 EPCAMP16422 314 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 KLRC2P26717 231 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CLCN4P51793 760 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 AP3M2P53677 418 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 STX17P56962 302 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 NLRP12P59046 1061 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CREMQ03060 361 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 ENPEPQ07075 957 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 BFSP1Q12934 665 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 SV2CQ496J9 727 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TDRD10Q5VZ19 366 aaKnown RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TMEM184AQ6ZMB5 413 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 ANKS3Q6ZW76 656 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 APPL2Q8NEU8 664 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 ZNF560Q96MR9 790 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 MED15Q96RN5 788 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 MTRRQ9UBK8 725 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
SSBP3-214ENST00000533209 BACE2Q9Y5Z0 518 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 HCFC2Q9Y5Z7 792 aa12.92□□□□□ -0.34
SSBP3-214ENST00000533209 KPNA7A9QM74 516 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 OAZ2O95190 189 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
SSBP3-214ENST00000533209 CYP11A1P05108 521 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 KRT13P13646 458 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 TYMPP19971 482 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 NDUFV1P49821 464 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 TFF2Q03403 129 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 C15orf39Q6ZRI6 1047 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 EP400NLQ6ZTU2 488 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 CASP10Q92851 521 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 GDAP2Q9NXN4 497 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 BARX2Q9UMQ3 279 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-214ENST00000533209 XIRP2A4UGR9 3374 aa12.91□□□□□ -0.34
SSBP3-214ENST00000533209 VWA8A3KMH1 1905 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 SCN1AP35498 2009 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 H3BQ06 376 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-214ENST00000533209 H7C4K7 107 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 CYB561D2O14569 222 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 VNN1O95497 513 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 C1RP00736 705 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 ODC1P11926 461 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 KCNA5P22460 613 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 OR1D2P34982 312 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 BIRC3Q13489 604 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 RAB33AQ14088 237 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 ZACNQ401N2 412 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 CTXN3Q4LDR2 81 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 ZNF280DQ6N043 979 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 ANKRD54Q6NXT1 300 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 USP37Q86T82 979 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 PALB2Q86YC2 1186 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms