RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGEF9O43307 516 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 XYLBO75191 536 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 GRAMD4Q6IC98 578 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 MPZL3Q6UWV2 235 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 PPWD1Q96BP3 646 aaKnown RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 TSPAN17Q96FV3 270 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 UNC45AQ9H3U1 944 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 TBK1Q9UHD2 729 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 AVPR1AP37288 418 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 LHX1P48742 406 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 NFIAQ12857 509 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 POLD3Q15054 466 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 UGP2Q16851 508 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 FSCBQ5H9T9 825 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 IQSEC1Q6DN90 963 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 IFNAR2P48551 515 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 BTG3Q14201 252 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 PDK1Q15118 436 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 SKA1Q96BD8 255 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 PABPC5Q96DU9 382 aaKnown RBP11.27□□□□□ -0.61
COLCA1-203ENST00000532918 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 FAM50BQ9Y247 325 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.61
COLCA1-203ENST00000532918 MEGF6O75095 1541 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 WNT10BO00744 389 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 KRT14P02533 472 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 KLRC1P26715 233 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 KLRK1P26718 216 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 EEF1DP29692 281 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 AXLP30530 894 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 EIF3EP60228 445 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 HERC6Q8IVU3 1022 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 MRPL40Q9NQ50 206 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ZMYM2Q9UBW7 1377 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 H3BRB1 525 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 CASP1P29466 404 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ETFBP38117 255 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 RANBP1P43487 201 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGDIAP52565 204 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 SP3Q02447 781 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 GFPT1Q06210 699 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 POU5F1BQ06416 359 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 HP1BP3Q5SSJ5 553 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 TRIM48Q8IWZ4 208 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 LRRC37BQ96QE4 947 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 MSH4O15457 936 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ZW10O43264 779 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 RHOBTB3O94955 611 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 HOXA10P31260 410 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 E2F4Q16254 413 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 C4orf22Q6V702 233 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 SYDE1Q6ZW31 735 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 CALML6Q8TD86 181 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 FBXO32Q969P5 355 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 TARS2Q9BW92 718 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 YIPF2Q9BWQ6 316 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 ANLNQ9NQW6 1124 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 TRIM33Q9UPN9 1127 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 F5H5T6 163 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 SYNCRIPO60506 623 aaKnown RBP11.26□□□□□ -0.61
COLCA1-203ENST00000532918 EMBQ6PCB8 327 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 NSMCE4AQ9NXX6 385 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 BCL9O00512 1426 aa11.26□□□□□ -0.61
COLCA1-203ENST00000532918 COL5A2P05997 1499 aaPredicted RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 TBKBP1A7MCY6 615 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 NDUFS3O75489 264 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
COLCA1-203ENST00000532918 F9P00740 461 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 CKMP06732 381 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SREBF1P36956 1147 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 GPS1Q13098 491 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 MTFR1Q15390 333 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
COLCA1-203ENST00000532918 SH2D3AQ9BRG2 576 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms