RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KCNH6Q9H252 994 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 SMOC2Q9H3U7 446 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 MAGEF1Q9HAY2 307 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 DPP3Q9NY33 737 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 PIRO00625 290 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 CPB1P15086 417 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 PTPN2P17706 415 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 RESP18Q5W5W9 173 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 NT5DC4Q86YG4 428 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 TCEAL8Q8IYN2 117 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 NOC3LQ8WTT2 800 aaKnown RBP18.66■□□□□ 0.58
PHRF1-204ENST00000532550 SAAL1Q96ER3 474 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 SENP8Q96LD8 212 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 C7orf25Q9BPX7 421 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 FGFBP2Q9BYJ0 223 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 MAFFQ9ULX9 164 aa18.66■□□□□ 0.58
PHRF1-204ENST00000532550 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ARHGEF37A1IGU5 675 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 PPEF2O14830 753 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ODC1P11926 461 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 TYMPP19971 482 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 PABPC1LQ4VXU2 614 aaKnown RBP18.65■□□□□ 0.58
PHRF1-204ENST00000532550 OVOS1Q6IE37 1185 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ARMCX5Q6P1M9 558 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 CACTINQ8WUQ7 758 aaKnown RBP18.65■□□□□ 0.58
PHRF1-204ENST00000532550 RSAD2Q8WXG1 361 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 HPS3Q969F9 1004 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 PCIF1Q9H4Z3 704 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
PHRF1-204ENST00000532550 AFF4Q9UHB7 1163 aaKnown RBP18.65■□□□□ 0.58
PHRF1-204ENST00000532550 CDH7Q9ULB5 785 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 KCNH3Q9ULD8 1083 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ZNF318Q5VUA4 2279 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 ANK1P16157 1881 aa18.65■□□□□ 0.58
PHRF1-204ENST00000532550 GOLGA8IPA6NC78 632 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 GOLGA8JA6NMD2 632 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 EXTL3O43909 919 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 SEC24AO95486 1093 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 PLA2G5P39877 138 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 CEP57L1Q8IYX8 460 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 ELMOD1Q8N336 334 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 SLC44A3Q8N4M1 653 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 CBWD1Q9BRT8 395 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 MFSD1Q9H3U5 465 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 RBAKQ9NYW8 714 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-204ENST00000532550 FBXL21Q9UKT6 434 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 DUSP12Q9UNI6 340 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 MRPS23Q9Y3D9 190 aaKnown RBP18.64■□□□□ 0.57
PHRF1-204ENST00000532550 MUC6Q6W4X9 2439 aa18.64■□□□□ 0.57
PHRF1-204ENST00000532550 SCN1AP35498 2009 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-204ENST00000532550 OR6C75A6NL08 312 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 KIAA0391O15091 583 aaKnown RBP18.63■□□□□ 0.57
PHRF1-204ENST00000532550 SPTLC1O15269 473 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 AFMP43652 599 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 TAF6P49848 677 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 KRT85P78386 507 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 TFAMQ00059 246 aaKnown RBP18.63■□□□□ 0.57
PHRF1-204ENST00000532550 FAM26FQ5R3K3 315 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 RNF19BQ6ZMZ0 732 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 UNC13DQ70J99 1090 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 METTL23Q86XA0 190 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 BRSK2Q8IWQ3 736 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 GPD1LQ8N335 351 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ZSWIM2Q8NEG5 633 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ITFG1Q8TB96 612 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 FGF13Q92913 245 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 SPATA32Q96LK8 384 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ZNF512Q96ME7 567 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-204ENST00000532550 BLZF1Q9H2G9 400 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 DSEQ9UL01 958 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ATP6V1DQ9Y5K8 247 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 INSL5Q9Y5Q6 135 aa18.63■□□□□ 0.57
PHRF1-204ENST00000532550 ANHXE9PGG2 379 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 CYB561D2O14569 222 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 EIF3DO15371 548 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHRF1-204ENST00000532550 PDGFBP01127 241 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-204ENST00000532550 RHOP08100 348 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 AVPR2P30518 371 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 GPR17Q13304 367 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 EFCAB13Q8IY85 973 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 THEM5Q8N1Q8 247 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 GLIS3Q8NEA6 775 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 PRRX2Q99811 253 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 CORO1BQ9BR76 489 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
PHRF1-204ENST00000532550 PVALEFA0A1B0GWK0 134 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 ZNF233A6NK53 670 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 NARSO43776 548 aaKnown RBP18.61■□□□□ 0.57
PHRF1-204ENST00000532550 OR4Q2P0C623 313 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 CASP1P29466 404 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 HTR4Q13639 388 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 MYBPC2Q14324 1141 aa18.61■□□□□ 0.57
PHRF1-204ENST00000532550 SV2CQ496J9 727 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms