RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MAN1A2O60476 641 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 OCM2P0CE71 109 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 OCMP0CE72 109 aaPredicted RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TPBGLP0DKB5 382 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PYGMP11217 842 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 BCRP11274 1271 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT10P13645 584 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CD44P16070 742 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 NFKBIAP25963 317 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 EEF1DP29692 281 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 LONP1P36776 959 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 STAT1P42224 750 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DHX34Q14147 1143 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CTTNQ14247 550 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CNGA3Q16281 694 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CAPN12Q6ZSI9 719 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT25Q7Z3Z0 450 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TMC3Q7Z5M5 1100 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 BBOF1Q8ND07 529 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 UCMAQ8WVF2 138 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DGCR14Q96DF8 476 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 NSL1Q96IY1 281 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 KLHL25Q9H0H3 589 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 FAM49AQ9H0Q0 323 aaPredicted RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ACAD9Q9H845 621 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ZC4H2Q9NQZ6 224 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CNOT8Q9UFF9 292 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ARIH1Q9Y4X5 557 aaPredicted RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SNCAIPQ9Y6H5 919 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 C19orf81C9J6K1 198 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PRPF3O43395 683 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 APOEP02649 317 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 LYNP07948 512 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ZNF24P17028 368 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT4P19013 534 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ATN1P54259 1190 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 CCDC15Q0P6D6 951 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 DPYDQ12882 1025 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 DNAJC3Q13217 504 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PPP2R5BQ15173 497 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PFKFB3Q16875 520 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 LONRF1Q17RB8 773 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM16LQ309B1 348 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ZNF662Q6ZS27 426 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 FAM13CQ8NE31 585 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 TTC16Q8NEE8 873 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 GRK7Q8WTQ7 553 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 NAT14Q8WUY8 206 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PARK7Q99497 189 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PORCNQ9H237 461 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 HSD3B7Q9H2F3 369 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 SMYD3Q9H7B4 428 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 HBS1LQ9Y450 684 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 COL4A1P02462 1669 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PDLIM1O00151 329 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 GNA14O95837 355 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 C6orf222P0C671 652 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ELNP15502 786 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 EPHB1P54762 984 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 AP1B1Q10567 949 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 MYBPC2Q14324 1141 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 CYTH1Q15438 398 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ADRM1Q16186 407 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 USP49Q70CQ1 688 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 CABP7Q86V35 215 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 MCF2L2Q86YR7 1114 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 FBXO16Q8IX29 292 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 TEPSINQ96N21 525 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM56Q9BRZ2 755 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ERP44Q9BS26 406 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 CELF4Q9BZC1 486 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 EDEM3Q9BZQ6 932 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 ARHGEF3Q9NR81 526 aa7.15□□□□□ -1.26
TGFBR3-209ENST00000532540 PDS5AQ29RF7 1337 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM47DPA6NHR8 397 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 B2RBV5 119 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 CDH16O75309 829 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 PSMG1O95456 288 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 PLEKP08567 350 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 MCF2P10911 925 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 BMP6P22004 513 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 CDK7P50613 346 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 NUP107P57740 925 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 FKBP1AP62942 108 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 IFI35P80217 286 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 ARHGAP4P98171 946 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 TSPY1Q01534 308 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 OCA2Q04671 838 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 GABPAQ06546 454 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 PHC3Q8NDX5 983 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 TTC8Q8TAM2 541 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 DQX1Q8TE96 717 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 GIPC3Q8TF64 312 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 MAML1Q92585 1016 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms