RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ROR1	Q01973	937 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	SNRNP35	Q16560	246 aa	Known RBP	18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	CTXN3	Q4LDR2	81 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	NT5DC4	Q86YG4	428 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	XXYLT1	Q8NBI6	393 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	CMAS	Q8NFW8	434 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	OR5B17	Q8NGF7	314 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	CXorf38	Q8TB03	319 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	HDAC7	Q8WUI4	952 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	NECTIN4	Q96NY8	510 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	MTMR12	Q9C0I1	747 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	KCTD10	Q9H3F6	313 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	DPP7	Q9UHL4	492 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	WDR27	A2RRH5	827 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370		H7C4K7	107 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	ZMYND10	O75800	440 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	OAZ2	O95190	189 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	ITGB3	P05106	788 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	POLR2B	P30876	1174 aa	Known RBP	18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	YWHAH	Q04917	246 aa	Predicted RBP	18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	C15orf39	Q6ZRI6	1047 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	C12orf56	Q8IXR9	622 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	CSGALNACT2	Q8N6G5	542 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	SMG7	Q92540	1137 aa	Known RBP	18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	BORCS6	Q96GS4	357 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	EPHX3	Q9H6B9	360 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	KIAA1586	Q9HCI6	787 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	SIX4	Q9UIU6	781 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	AGAP1	Q9UPQ3	857 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	TCHH	Q07283	1943 aa		18.82	■□□□□ 0.6
CTSB-223	ENST00000532370	CIT	O14578	2027 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	C8A	P07357	584 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	DLAT	P10515	647 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	CYP24A1	Q07973	514 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	KCNB1	Q14721	858 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	ZNF280D	Q6N043	979 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	ELMSAN1	Q6PJG2	1045 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	RNF135	Q8IUD6	432 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	SLC7A14	Q8TBB6	771 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	CACTIN	Q8WUQ7	758 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	CCDC47	Q96A33	483 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	CCDC127	Q96BQ5	260 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	PRKD2	Q9BZL6	878 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	GZF1	Q9H116	711 aa	Predicted RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	INTS13	Q9NVM9	706 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	DMAC2	Q9NW81	257 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	ZDHHC7	Q9NXF8	308 aa		18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	CGN	Q9P2M7	1197 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-223	ENST00000532370	C2CD4D	B7Z1M9	353 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	CYB561D2	O14569	222 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	CCL16	O15467	120 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	EXOC3	O60645	756 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	ABLIM3	O94929	683 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	PAPLN	O95428	1278 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	OR4Q2	P0C623	313 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	TYMP	P19971	482 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	TAF6	P49848	677 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	PPM1L	Q5SGD2	360 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	LIN9	Q5TKA1	542 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	OVOS1	Q6IE37	1185 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	USP37	Q86T82	979 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	ZNF461	Q8TAF7	563 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	GOLGA5	Q8TBA6	731 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	PLEKHO2	Q8TD55	490 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	VWA8	A3KMH1	1905 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	TRIO	O75962	3097 aa		18.8	■□□□□ 0.6
CTSB-223	ENST00000532370	KPNA7	A9QM74	516 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	PDXK	O00764	312 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	SEC24A	O95486	1093 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	KRT19	P08727	400 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	TMEM191B	P0C7N4	346 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	ODC1	P11926	461 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	CASP4	P49662	377 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	CDR1	P51861	262 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	PSMD6	Q15008	389 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	DUOXA2	Q1HG44	320 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	WSCD1	Q658N2	575 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	CCDC34	Q96HJ3	373 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	MFSD14A	Q96MC6	490 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	TIGD1	Q96MW7	591 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	TMEM209	Q96SK2	561 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	PIDD1	Q9HB75	910 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	WDR6	Q9NNW5	1121 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	MUTYH	Q9UIF7	546 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	ITGA11	Q9UKX5	1188 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	PCDHA5	Q9Y5H7	936 aa		18.79	■□□□□ 0.6
CTSB-223	ENST00000532370	N4BP1	O75113	896 aa	Known RBP	18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	VNN2	O95498	520 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	NR3C1	P04150	777 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	ATF2	P15336	505 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	NTHL1	P78549	312 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	RBP5	P82980	135 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	SURF1	Q15526	300 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	SV2C	Q496J9	727 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	RNF19B	Q6ZMZ0	732 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	CCDC149	Q6ZUS6	474 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	WDR49	Q8IV35	697 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	OR10T2	Q8NGX3	314 aa		18.78	■□□□□ 0.6
CTSB-223	ENST00000532370	ZNF516	Q92618	1163 aa		18.78	■□□□□ 0.6

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