RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SLC20A1Q8WUM9 679 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 RAB17Q9H0T7 212 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 LHX5Q9H2C1 402 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
CHD7-211ENST00000532149 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 PCDHA3Q9Y5H8 950 aa13.11□□□□□ -0.31
CHD7-211ENST00000532149 A0A087WZ62 844 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 FAM187AA6NFU0 413 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 HAS3O00219 553 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 PODXLO00592 558 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 NDC80O14777 642 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 DUSP11O75319 330 aaKnown RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 IGHA2P01877 340 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 STAG3L1P0CL83 205 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 AKR1A1P14550 325 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 CDH5P33151 784 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 YARSP54577 528 aaKnown RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 RWDD2BP57060 319 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 VSNL1P62760 191 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 GABPB1Q06547 395 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 AMHR2Q16671 573 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 SPDYCQ5MJ68 293 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 KIAA0319LQ8IZA0 1049 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 NPLOC4Q8TAT6 608 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 CAVIN3Q969G5 261 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 PCDHB18PQ96TA0 734 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 FDXACB1Q9BRP7 624 aaPredicted RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
CHD7-211ENST00000532149 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 EVPLQ92817 2033 aa13.1□□□□□ -0.31
CHD7-211ENST00000532149 A6NNZ2 444 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 KRIT1O00522 736 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
CHD7-211ENST00000532149 CA12O43570 354 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TBC1D8O95759 1140 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
CHD7-211ENST00000532149 PAX3P23760 479 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 CHRNA3P32297 505 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
CHD7-211ENST00000532149 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
CHD7-211ENST00000532149 IGBP1P78318 339 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
CHD7-211ENST00000532149 ACAP1Q15027 740 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TUBB8Q3ZCM7 444 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 THNSL1Q8IYQ7 743 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 OR5B17Q8NGF7 314 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 KAT5Q92993 513 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 PNKPQ96T60 521 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 GDF3Q9NR23 364 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 IP6K2Q9UHH9 426 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
CHD7-211ENST00000532149 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 DDX3YO15523 660 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 NCK2O43639 380 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 SPOPO43791 374 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 CD4P01730 458 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 HARSP12081 509 aaKnown RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 DESP17661 470 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 CXCR5P32302 372 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 PNPLA4P41247 253 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 FCGRTP55899 365 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 NOMO3P69849 1222 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
CHD7-211ENST00000532149 C2orf54Q08AI8 447 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CHD7-211ENST00000532149 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms