RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SIP14410 1827 aa6.34□□□□□ -1.4
HMGB1P42-201ENST00000532126 PHLPP2Q6ZVD8 1323 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 CNTNAP2Q9UHC6 1331 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 A0A1B0GUA9 196 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 C5orf67F2Z3F1 127 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 H3BNC9 293 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 K7ERI5 159 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ACKR2O00590 384 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LPXNO60711 386 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 CUTAO60888 179 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF623O75123 536 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 TBCAO75347 108 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 GJB6O95452 261 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 RB1P06400 928 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ITGA4P13612 1032 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 PLS3P13797 630 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ATF7P17544 494 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ARF4P18085 180 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 STAT6P42226 847 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 NPTX2P47972 431 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ME1P48163 572 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MAPK7Q13164 816 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 CLN3Q13286 438 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 GPM6BQ13491 265 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 SEPT6Q14141 434 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MORC3Q14149 939 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MAPRE1Q15691 268 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 FAM187BQ17R55 369 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 GFOD2Q3B7J2 385 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 CLLU1OSQ5K130 101 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 TTC39BQ5VTQ0 682 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLC27A1Q6PCB7 646 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 GLB1LQ6UWU2 654 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPL10Q7Z7H8 261 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 C14orf80Q86SX3 495 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 DAW1Q8N136 415 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LRRC43Q8N309 656 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 RIN3Q8TB24 985 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LRRC15Q8TF66 581 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 RSPH1Q8WYR4 309 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LARP4BQ92615 738 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LPPQ93052 612 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 CASD1Q96PB1 797 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 NTPCRQ9BSD7 190 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 PLVAPQ9BX97 442 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPL9Q9BYD2 267 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 PANK2Q9BZ23 570 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 UBN1Q9NPG3 1134 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 BLOC1S4Q9NUP1 217 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 LARSQ9P2J5 1176 aaKnown RBP6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 STK17AQ9UEE5 414 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ODF2LQ9ULJ1 636 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZDHHC9Q9Y397 364 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 SZT2Q5T011 3432 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 COL4A6Q14031 1691 aa6.33□□□□□ -1.4
HMGB1P42-201ENST00000532126 A0A087X0B3 334 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 H0YCG3 227 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MEN1O00255 615 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 N4BP3O15049 544 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 GRM6O15303 877 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLC16A4O15374 487 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 AKAP10O43572 662 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 OFD1O75665 1012 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 NPTXRO95502 500 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 PRKCBP05771 671 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 LINC00271P0C7V0 271 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 LAG3P18627 525 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MCM4P33991 863 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 KRT85P78386 507 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 RNASELQ05823 741 aaKnown RBP6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 STRN3Q13033 797 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 GIT2Q14161 759 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 GRAMD1BQ3KR37 738 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 NOMO2Q5JPE7 1267 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 ATF7IP2Q5U623 682 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 NXNQ6DKJ4 435 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 SHC4Q6S5L8 630 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 LRRC55Q6ZSA7 311 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 CDR2LQ86X02 465 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 PASD1Q8IV76 773 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 TCEAL8Q8IYN2 117 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 THNSL1Q8IYQ7 743 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MYCT1Q8N699 235 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 PDILTQ8N807 584 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 KLHL23Q8NBE8 558 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 URGCPQ8TCY9 931 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 P2RX5Q93086 422 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 REEP2Q9BRK0 252 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 ADPGKQ9BRR6 497 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 APOL6Q9BWW8 343 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms