RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 KDF1Q8NAX2 398 aaPredicted RBP9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 SNX29Q8TEQ0 813 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 NXPE3Q969Y0 559 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 TIPINQ9BVW5 301 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 SNTG2Q9NY99 539 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 FBXO2Q9UK22 296 aaPredicted RBP9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 PCDHA7Q9UN72 937 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 DUSP12Q9UNI6 340 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
PTP4A2-213ENST00000532001 NOTCH4Q99466 2003 aa9.46□□□□□ -0.89
PTP4A2-213ENST00000532001 FAM237AA0A1B0GTK4 181 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 GOLGA6L4A6NEF3 574 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 N4BP1O75113 896 aaKnown RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 TADA2AO75478 443 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 RFPL2O75678 378 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 HNRNPA1P09651 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 HOXA9P31269 272 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 LONP1P36776 959 aaKnown RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 CLCN5P51795 746 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 XKR4Q5GH76 650 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 HYIQ5T013 277 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 ATF7IP2Q5U623 682 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 KRT79Q5XKE5 535 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 DAW1Q8N136 415 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 SMG7Q92540 1137 aaKnown RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 B3GALT6Q96L58 329 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 AK8Q96MA6 479 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 DRC1Q96MC2 740 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 UROC1Q96N76 676 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 PPP1R10Q96QC0 940 aaKnown RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 PAAF1Q9BRP4 392 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 KIFC3Q9BVG8 833 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 C17orf75Q9HAS0 396 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 KCNK12Q9HB15 430 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 PTPRHQ9HD43 1115 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 ARHGAP28Q9P2N2 729 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 TNFSF13BQ9Y275 285 aa9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 ZFP37Q9Y6Q3 630 aaPredicted RBP9.46□□□□□ -0.9
PTP4A2-213ENST00000532001 GVINP1Q7Z2Y8 2422 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MYO15AQ9UKN7 3530 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CASTOR2A6NHX0 329 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 PROB1E7EW31 1015 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 K7ERI5 159 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 SLC26A4O43511 780 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 PRPF40AO75400 957 aaKnown RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 FGFR3P22607 806 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 PROZP22891 400 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CMA1P23946 247 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MARCKSP29966 332 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 NPTX2P47972 431 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MAPK7Q13164 816 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 DMP1Q13316 513 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 PSMD5Q16401 504 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 SKOR2Q2VWA4 1001 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 FAM171A1Q5VUB5 890 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 C1orf186Q6ZWK4 172 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 RTL10Q7L3V2 364 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 PALB2Q86YC2 1186 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 TMEM105Q8N8V8 129 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 LNX1Q8TBB1 728 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 KCNN1Q92952 543 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MYADMQ96S97 322 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 ACO2Q99798 780 aaKnown RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 MRPL4Q9BYD3 311 aaKnown RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CDT1Q9H211 546 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 TOPORSQ9NS56 1045 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.93e-7■□□□□ 9.4
PTP4A2-213ENST00000532001 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 CACNG4Q9UBN1 327 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 DNM3Q9UQ16 869 aa9.45□□□□□ -0.9
PTP4A2-213ENST00000532001 DMDP11532 3685 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 ANHXE9PGG2 379 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 E9PMD0 336 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 ABLIM1O14639 778 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 HIP1RO75146 1068 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 MCF2P10911 925 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 KCNE1P15382 129 aa9.44□□□□□ -0.9
PTP4A2-213ENST00000532001 RPL17P18621 184 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms