RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 SH2B1Q9NRF2 756 aaPredicted RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 ZMIZ1Q9ULJ6 1067 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 INVSQ9Y283 1065 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 LAMA5O15230 3695 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 SETXQ7Z333 2677 aaKnown RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 GCN1Q92616 2671 aaKnown RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 PTPRDP23468 1912 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TCHHQ07283 1943 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 SCN1AP35498 2009 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 BTBD18B2RXH4 712 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 LRP3O75074 770 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 LARGE1O95461 756 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 PRAMEF12O95522 483 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 NEFLP07196 543 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 CPB1P15086 417 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 CTHP32929 405 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 GUCY2FP51841 1108 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 FOXC1Q12948 553 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 MRPL58Q14197 206 aaKnown RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 CPLX2Q6PUV4 134 aaKnown RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 MAMSTRQ6ZN01 415 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TMC8Q8IU68 726 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 NECAB1Q8N987 351 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 C12orf50Q8NA57 414 aaPredicted RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 DEPTORQ8TB45 409 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 CSGALNACT1Q8TDX6 532 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 CHFRQ96EP1 664 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 ZNF512Q96ME7 567 aaPredicted RBP9.84□□□□□ -0.83
USF1-210ENST00000531842 MTMR9Q96QG7 549 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TMEM209Q96SK2 561 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 ADPGKQ9BRR6 497 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TUBGCP4Q9UGJ1 667 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 TPCN1Q9ULQ1 816 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 YIPF1Q9Y548 306 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 CYP46A1Q9Y6A2 500 aa9.84□□□□□ -0.83
USF1-210ENST00000531842 OTOL1A6NHN0 477 aaPredicted RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 ZNF197O14709 1029 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 PROS1P07225 676 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 CYP4F8P98187 520 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 PPP2R5DQ14738 602 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 TRIM68Q6AZZ1 485 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 ALKAL1Q6UXT8 129 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 WDR5BQ86VZ2 330 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 ARID3BQ8IVW6 561 aaPredicted RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 YAF2Q8IY57 180 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 STKLD1Q8NE28 680 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 DEPDC1BQ8WUY9 529 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 TBC1D32Q96NH3 1257 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 HHIPQ96QV1 700 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 TARS2Q9BW92 718 aaKnown RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 FBRSL1Q9HCM7 1045 aaKnown RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 ASAH2Q9NR71 780 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 ORC3Q9UBD5 711 aaPredicted RBP9.83□□□□□ -0.84
USF1-210ENST00000531842 PI4KAP42356 2102 aa9.83□□□□□ -0.84
USF1-210ENST00000531842 MYBPHLA2RUH7 354 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 ARHGEF35A5YM69 484 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 PPEF2O14830 753 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 TRAPPC3O43617 180 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 NEMFO60524 1076 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 RPP40O75818 363 aaKnown RBP9.82□□□□□ -0.84
USF1-210ENST00000531842 EPN2O95208 641 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 ZNF806P0C7X5 589 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 CYP11B2P19099 503 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 MCM4P33991 863 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 MCM7P33993 719 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 KRT2P35908 639 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 NAMPTP43490 491 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 EPHA5P54756 1037 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 SHC2P98077 582 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 DUSP4Q13115 394 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 CCINQ13939 588 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 LRRC32Q14392 662 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 DCAF4L1Q3SXM0 396 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 ZNF568Q3ZCX4 644 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 IQCEQ6IPM2 695 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 FSTL4Q6MZW2 842 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 KIAA1211LQ6NV74 962 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 UNQ6494/PRO21346Q6UXR6 183 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 ELMOD1Q8N336 334 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 MCPH1Q8NEM0 835 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 RIN3Q8TB24 985 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 DDX12PQ92771 950 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 UROC1Q96N76 676 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 ACO2Q99798 780 aaKnown RBP9.82□□□□□ -0.84
USF1-210ENST00000531842 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 C2orf40Q9H1Z8 148 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 TRPV4Q9HBA0 871 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 TRPV5Q9NQA5 729 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 PDRG1Q9NUG6 133 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
USF1-210ENST00000531842 MYOFQ9NZM1 2061 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms