RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 PDZD4Q76G19 769 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-205ENST00000531042 MAP4K3Q8IVH8 894 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 CD302Q8IX05 232 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 ELMOD1Q8N336 334 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 BEST2Q8NFU1 509 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 ZNF512Q96ME7 567 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-205ENST00000531042 OXCT2Q9BYC2 517 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-205ENST00000531042 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
CPSF1-205ENST00000531042 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 ANKRD63C9JTQ0 380 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 PPEF2O14830 753 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 LRRN2O75325 713 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
CPSF1-205ENST00000531042 CYP4A22Q5TCH4 519 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 JADE1Q6IE81 842 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 IQCEQ6IPM2 695 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 USP37Q86T82 979 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 C1orf210Q8IVY1 113 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 HS6ST3Q8IZP7 471 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
CPSF1-205ENST00000531042 ELSPBP1Q96BH3 223 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 CEP72Q9P209 647 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 FBXO2Q9UK22 296 aaPredicted RBP17.14■□□□□ 0.33
CPSF1-205ENST00000531042 ANK1P16157 1881 aa17.14■□□□□ 0.33
CPSF1-205ENST00000531042 NRG2O14511 850 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-205ENST00000531042 VNN2O95498 520 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 OR4Q2P0C623 313 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 TYMPP19971 482 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 FCARP24071 287 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 LILRA4P59901 499 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 RESTQ13127 1097 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 STK17AQ9UEE5 414 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-205ENST00000531042 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
CPSF1-205ENST00000531042 STYXL1Q9Y6J8 313 aa17.13■□□□□ 0.33
CPSF1-205ENST00000531042 OR6C75A6NL08 312 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 TISP43B9A030 160 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 MOSPD3O75425 235 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 NFICP08651 508 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 SYT1P21579 422 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 PAX3P23760 479 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ACOT2P49753 483 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 EPHA5P54756 1037 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 GPR17Q13304 367 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 TMEM132DQ14C87 1099 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 UBXN2BQ14CS0 331 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 FAM78AQ5JUQ0 283 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 C9orf57Q5W0N0 161 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ADALQ6DHV7 355 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 OVOS1Q6IE37 1185 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 DYMQ7RTS9 669 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 PGLYRP2Q96PD5 576 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ASB7Q9H672 318 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 ZFP14Q9HCL3 533 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 DERAQ9Y315 318 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 YIPF1Q9Y548 306 aa17.12■□□□□ 0.33
CPSF1-205ENST00000531042 RIF1Q5UIP0 2472 aaKnown RBP17.11■□□□□ 0.33
CPSF1-205ENST00000531042 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 FAM170BA6NMN3 283 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 PIRO00625 290 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 SPTLC1O15269 473 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 SP9P0CG40 484 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 MYL4P12829 197 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 CD72P21854 359 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 DUSP4Q13115 394 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 MYBPC2Q14324 1141 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 SFR1Q86XK3 245 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 SENP8Q96LD8 212 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 ZSWIM3Q96MP5 696 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 CLIC6Q96NY7 704 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 CRISPLD1Q9H336 500 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 LTB4R2Q9NPC1 389 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 ASAH2Q9NR71 780 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 AGO2Q9UKV8 859 aaKnown RBP17.11■□□□□ 0.33
CPSF1-205ENST00000531042 TSC2P49815 1807 aa17.11■□□□□ 0.33
CPSF1-205ENST00000531042 FRYLO94915 3013 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 PATJQ8NI35 1801 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 PPP1R37O75864 691 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 ODC1P11926 461 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 GJA1P17302 382 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
CPSF1-205ENST00000531042 PLD1Q13393 1074 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 GRM2Q14416 872 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 CENPPQ6IPU0 288 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 MAML2Q8IZL2 1156 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms