RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 UGCGQ16739 394 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 TUBB8Q3ZCM7 444 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CBWD6Q4V339 395 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CBWD3Q5JTY5 395 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CBWD5Q5RIA9 395 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 FAM102BQ5T8I3 360 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 C11orf63Q6NUN7 778 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 C8orf74Q6P047 294 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CCNI2Q6ZMN8 369 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 USP50Q70EL3 339 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 FASTKD5Q7L8L6 764 aaKnown RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 PEX26Q7Z412 305 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 PRRT2Q7Z6L0 340 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 ZNF677Q86XU0 584 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 IFT20Q8IY31 132 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 FAM71AQ8IYT1 594 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ANKRD13AQ8IZ07 590 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ANKRD35Q8N283 1001 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 GPD1LQ8N335 351 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 RASGEF1CQ8N431 466 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 FBXL13Q8NEE6 735 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 SHCBP1Q8NEM2 672 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 FAM71BQ8TC56 605 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 AFAP1L1Q8TED9 768 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 PARD3BQ8TEW8 1205 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 COG1Q8WTW3 980 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 TCP11Q8WWU5 503 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 SLC7A3Q8WY07 619 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 SHC3Q92529 594 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CAVIN3Q969G5 261 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 RUNDC3BQ96NL0 473 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 NT5C1BQ96P26 610 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 RHOXF2Q9BQY4 288 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 PPP1R12CQ9BZL4 782 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 SLITRK6Q9H5Y7 841 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 DHX33Q9H6R0 707 aaKnown RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 SPON1Q9HCB6 807 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 NRBP2Q9NSY0 501 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 PSD3Q9NYI0 1048 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 LCMT1Q9UIC8 334 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 RIPK3Q9Y572 518 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 LCTP09848 1927 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 LRRC37A2A6NM11 1700 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ZNF233A6NK53 670 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 CCDC169A6NNP5 214 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 PDE2AO00408 941 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 DDX3XO00571 662 aaKnown RBP eCLIP5.98□□□□□ -1.45
PCF11-205ENST00000530906 HNRNPDLO14979 420 aaKnown RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 EXTL3O43909 919 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ZNF862O60290 1169 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 RTN2O75298 545 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 DEAF1O75398 565 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 SASH3O75995 380 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 MICAL2O94851 1124 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 GGPS1O95749 300 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TRIM49P0CI25 452 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TRIM49CP0CI26 452 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ERCC3P19447 782 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 WEE1P30291 646 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 GBP1P32455 592 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 NOP2P46087 812 aaKnown RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 ALDH5A1P51649 535 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 ARSDP51689 593 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 POLGP54098 1239 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 GALCP54803 685 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 GPLD1P80108 840 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 POU5F1Q01860 360 aaKnown RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 CYP24A1Q07973 514 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 PAK2Q13177 524 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 PPIL2Q13356 520 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 CUL1Q13616 776 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 EMC2Q15006 297 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 PSMD6Q15008 389 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 SURF1Q15526 300 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TERF2Q15554 542 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ALS2CLQ60I27 953 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 SWSAP1Q6NVH7 229 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 NFRKBQ6P4R8 1299 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 METTL7BQ6UX53 244 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ZPBP2Q6X784 338 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TRIM72Q6ZMU5 477 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 MAATS1Q7Z4T9 603 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ANKMY2Q8IV38 441 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 EFCAB13Q8IY85 973 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 MREGQ8N565 214 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 UBL4BQ8N7F7 174 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 USP38Q8NB14 1042 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 AENQ8WTP8 325 aaKnown RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 U2AF1L4Q8WU68 220 aaKnown RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 EXOC4Q96A65 974 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 HES6Q96HZ4 224 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 FAXDC2Q96IV6 333 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 CAPZA3Q96KX2 299 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 RPS6KC1Q96S38 1066 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 AGPAT1Q99943 283 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 CBWD1Q9BRT8 395 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 FAM129AQ9BZQ8 928 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 GPR88Q9GZN0 384 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms