RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 TBC1D13Q9NVG8 400 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CACNG4Q9UBN1 327 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FBXL5Q9UKA1 691 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 AJAP1Q9UKB5 411 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 POLIQ9UNA4 740 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PCDHB4Q9Y5E5 795 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SNX9Q9Y5X1 595 aa9.13□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 NRDCO43847 1150 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 HUS1O60921 280 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 TADA2AO75478 443 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DGKIO75912 1065 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 B3GAT3O94766 335 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 GFPT2O94808 682 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DDHD2O94830 711 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PNMA6AP0CW24 399 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FERP16591 822 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CD58P19256 250 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SOX5P35711 763 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CDH8P55286 799 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 LILRA4P59901 499 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 GCNT1Q02742 428 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 UPP1Q16831 310 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DSTYKQ6XUX3 929 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CRIPAKQ8N1N5 446 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ZNF830Q96NB3 372 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PANX2Q96RD6 677 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ARID3AQ99856 593 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ABHD10Q9NUJ1 306 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 MYO6Q9UM54 1294 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PRG3Q9Y2Y8 225 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SLC4A7Q9Y6M7 1214 aa9.12□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 F8VZ95 297 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CYB561D2O14569 222 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SPTLC1O15269 473 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CCDC172P0C7W6 258 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SKILP12757 684 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ASPAP45381 313 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 RAP1GAPP47736 663 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 JAM2P57087 298 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DSC1Q08554 894 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 BTG3Q14201 252 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FMNL3Q8IVF7 1028 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 LRRC8AQ8IWT6 810 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 LRRC43Q8N309 656 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 APPL2Q8NEU8 664 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 RSPH1Q8WYR4 309 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SYN2Q92777 582 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FAXDC2Q96IV6 333 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DNAJC7Q99615 494 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 BAG1Q99933 345 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PAAF1Q9BRP4 392 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SMYD3Q9H7B4 428 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 NRDE2Q9H7Z3 1164 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CYP3A43Q9HB55 503 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CISHQ9NSE2 258 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 AIPL1Q9NZN9 384 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 DNAJB4Q9UDY4 337 aa9.11□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 I3L4J1 428 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 NRP1O14786 923 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CYP26A1O43174 497 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 B4GALT3O60512 393 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SERPING1P05155 500 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ATP2A2P16615 1042 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ACO1P21399 889 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PAX3P23760 479 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 IGFBP6P24592 240 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 MAGEA10P43363 369 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 BRCC3P46736 316 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SLC11A1P49279 550 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 BCAR1P56945 870 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 PTK2Q05397 1052 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 KLHL30Q0D2K2 578 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 TDRD12Q587J7 1177 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 TMEM270Q6UE05 265 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CYP26C1Q6V0L0 522 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 IRF2BP2Q7Z5L9 587 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 METTL23Q86XA0 190 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 TMTC1Q8IUR5 882 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 FAM71AQ8IYT1 594 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CMTR2Q8IYT2 770 aaKnown RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 TTC39CQ8N584 583 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 RBBP8NLQ8NC74 664 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 CCDC112Q8NEF3 446 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 OR6B3Q8NGW1 331 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 HASPINQ8TF76 798 aa9.1□□□□□ -0.95
NEDD8-MDP1-201ENST00000530579 SHC3Q92529 594 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms