RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ALOXE3Q9BYJ1 711 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 ALG13Q9NP73 1137 aaKnown RBP3.96□□□□□ -1.78
NUP98-218ENST00000530516 SEMA4GQ9NTN9 838 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 TBCCD1Q9NVR7 557 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 TESQ9UGI8 421 aaKnown RBP3.96□□□□□ -1.78
NUP98-218ENST00000530516 KCNE5Q9UJ90 142 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 SLC45A2Q9UMX9 530 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 SPEF1Q9Y4P9 236 aa3.96□□□□□ -1.78
NUP98-218ENST00000530516 LOC105371045A0A1W2PR82 267 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 NT5C1B-RDH14C9J2C7 533 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 HAUS5O94927 633 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 IGLV2-14P01704 120 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CD1AP06126 327 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 RECQLP46063 649 aaPredicted RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 RARRES1P49788 294 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CACNA2D1P54289 1103 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CREMQ03060 361 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 ZNF169Q14929 603 aaPredicted RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 RAB39AQ14964 217 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CYP2A13Q16696 494 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 TMEM240Q5SV17 173 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 SRRM1Q8IYB3 904 aaKnown RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 FITM2Q8N6M3 262 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 TBC1D15Q8TC07 691 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 SMG7Q92540 1137 aaKnown RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 ANKS1AQ92625 1134 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 BOD1Q96IK1 185 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 KLHL32Q96NJ5 620 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 HEPHQ9BQS7 1158 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 KIAA1586Q9HCI6 787 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CALCOCO1Q9P1Z2 691 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 SLC17A6Q9P2U8 582 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 DMTF1Q9Y222 760 aa3.95□□□□□ -1.78
NUP98-218ENST00000530516 CFAP20Q9Y6A4 193 aaKnown RBP3.95□□□□□ -1.78
NUP98-218ENST00000530516 SLC43A1O75387 559 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 AGFG2O95081 481 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 GPANK1O95872 356 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 MALP21145 153 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 EXOSC10Q01780 885 aaKnown RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 FOXF2Q12947 444 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 SNAPC2Q13487 334 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 GEN1Q17RS7 908 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 KHDC1Q4VXA5 237 aaKnown RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 UTP14CQ5TAP6 766 aaKnown RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 KIAA1614Q5VZ46 1190 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 Q6ZNX1 250 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 PRR18Q8N4B5 295 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 SLC44A3Q8N4M1 653 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 CPA6Q8N4T0 437 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 TMIEQ8NEW7 156 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 NLGN4YQ8NFZ3 816 aaPredicted RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 CHMP4CQ96CF2 233 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 RNF31Q96EP0 1072 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 VRK1Q99986 396 aaPredicted RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 UNKLQ9H9P5 680 aaKnown RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 GALNT9Q9HCQ5 603 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 JKAMPQ9P055 326 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 LRIT1Q9P2V4 623 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 LUC7L2Q9Y383 392 aaKnown RBP3.94□□□□□ -1.78
NUP98-218ENST00000530516 SALL3Q9BXA9 1300 aa3.94□□□□□ -1.78
NUP98-218ENST00000530516 MYADML2A6NDP7 307 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 PRSS29PA6NIE9 313 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 E9PLN8 166 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 F2RL2O00254 374 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 ORC4O43929 436 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 MTHFD1P11586 935 aaKnown RBP3.93□□□□□ -1.78
NUP98-218ENST00000530516 PDCP20941 246 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 CCND1P24385 295 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 CTGFP29279 349 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 NEK2P51955 445 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 VAV2P52735 878 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 SIM1P81133 766 aaPredicted RBP3.93□□□□□ -1.78
NUP98-218ENST00000530516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.93□□□□□ -1.78
NUP98-218ENST00000530516 ZNF365Q70YC5 407 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 CATIPQ7Z7H3 387 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 MIER2Q8N344 545 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 LRIG1Q96JA1 1093 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 Q96MF0 132 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 PNKPQ96T60 521 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 VKORC1Q9BQB6 163 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 TCF7L1Q9HCS4 588 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 CTTNBP2NLQ9P2B4 639 aa3.93□□□□□ -1.78
NUP98-218ENST00000530516 ARHGEF17Q96PE2 2063 aaPredicted RBP3.93□□□□□ -1.78
NUP98-218ENST00000530516 RBMXL2O75526 392 aaKnown RBP3.92□□□□□ -1.78
NUP98-218ENST00000530516 ABLIM3O94929 683 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 SNUPNO95149 360 aaKnown RBP3.92□□□□□ -1.78
NUP98-218ENST00000530516 POU2F2P09086 479 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 MRPS35P82673 323 aaKnown RBP3.92□□□□□ -1.78
NUP98-218ENST00000530516 ATP2B3Q16720 1220 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 PPP4R3AQ6IN85 833 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 SLC4A10Q6U841 1118 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 GADL1Q6ZQY3 521 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 USP45Q70EL2 814 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 PTF1AQ7RTS3 328 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 BHLHA9Q7RTU4 235 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 TMPRSS9Q7Z410 1059 aa3.92□□□□□ -1.78
NUP98-218ENST00000530516 TTC7BQ86TV6 843 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms