RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 A0A1B0GTW7 788 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 PLEKHD1A6NEE1 506 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 A6NNZ2 444 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 CTXN1P60606 82 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 GUCY1B3Q02153 619 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 DSC2Q02487 901 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 SAFBQ15424 915 aaKnown RBP eCLIP5.79□□□□□ -1.48
C11orf88-204ENST00000529661 COBLL1Q53SF7 1204 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 GADL1Q6ZQY3 521 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 OVCH2Q7RTZ1 564 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 ZBTB34Q8NCN2 500 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 TBC1D15Q8TC07 691 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 TMEM60Q9H2L4 133 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 RNPEPQ9H4A4 650 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 SERHL2Q9H4I8 314 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 CYP4F11Q9HBI6 524 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 AATKQ6ZMQ8 1374 aa5.79□□□□□ -1.48
C11orf88-204ENST00000529661 MARCH11A6NNE9 402 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 APAF1O14727 1248 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 FOXN1O15353 648 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 B3GALT2O43825 422 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 ZBED1O96006 694 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 ALDH2P05091 517 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 CFIP05156 583 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 RHCEP18577 417 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 FGFR4P22455 802 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 BMPR1AP36894 532 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 HSD11B2P80365 405 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 RHDQ02161 417 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 OCA2Q04671 838 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 SPDYE7PQ495Y7 208 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 PPP4R3AQ6IN85 833 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 ARHGEF19Q8IW93 802 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 KIAA0319LQ8IZA0 1049 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 LCORLQ8N3X6 602 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 FITM2Q8N6M3 262 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 DCBLD1Q8N8Z6 715 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 PPP1R35Q8TAP8 253 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 IFI44Q8TCB0 444 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 RNF31Q96EP0 1072 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 CLPTM1LQ96KA5 538 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 PSMD1Q99460 953 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 ADAM2Q99965 735 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 USP25Q9UHP3 1055 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 L1RE1Q9UN81 338 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 PCDHB1Q9Y5F3 818 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 NOX1Q9Y5S8 564 aa5.78□□□□□ -1.48
C11orf88-204ENST00000529661 LOC102724159A0A0B4J2E5 919 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 TPP1O14773 563 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 GRM6O15303 877 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 SUV39H1O43463 412 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 DTNBO60941 627 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 CDKL5O76039 1030 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 UBXN7O94888 489 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 SPDEFO95238 335 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 GPANK1O95872 356 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 ELANEP08246 267 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 MYBP10242 640 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 GCSHP23434 173 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 ZEB1P37275 1124 aaPredicted RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 ZNF280AP59817 542 aaPredicted RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 PWP2Q15269 919 aaKnown RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 LLGL1Q15334 1064 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 DACT2Q5SW24 774 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 FOXR2Q6PJQ5 311 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 C11orf96Q7Z7L8 435 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 DENND1CQ8IV53 801 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 TMEM132CQ8N3T6 1108 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 CAMKK1Q8N5S9 505 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 MARS2Q96GW9 593 aaKnown RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 LRFN3Q9BTN0 628 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 ALOXE3Q9BYJ1 711 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 SLITRK6Q9H5Y7 841 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 FAM204AQ9H8W3 233 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 FAM30AQ9NZY2 134 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 MTO1Q9Y2Z2 717 aaKnown RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 DMRT1Q9Y5R6 373 aa5.77□□□□□ -1.49
C11orf88-204ENST00000529661 CFAP20Q9Y6A4 193 aaKnown RBP5.77□□□□□ -1.49
C11orf88-204ENST00000529661 CCDC78A2IDD5 438 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 SGTAO43765 313 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 ERN1O75460 977 aaKnown RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 HAUS5O94927 633 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 GCP02774 474 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 CD1AP06126 327 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 SBK3P0C264 359 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 NBPF7P0C2Y1 421 aaPredicted RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 MTHFD1P11586 935 aaKnown RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 CKBP12277 381 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 AGFG1P52594 562 aaKnown RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 NOMO3P69849 1222 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 PICALMQ13492 652 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 RAB39AQ14964 217 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 CRB2Q5IJ48 1285 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 NOMO2Q5JPE7 1267 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 B3GNTL1Q67FW5 361 aaPredicted RBP5.76□□□□□ -1.49
C11orf88-204ENST00000529661 IL31Q6EBC2 164 aa5.76□□□□□ -1.49
C11orf88-204ENST00000529661 BEND2Q8NDZ0 799 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms