RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ACKR2O00590 384 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 N4BP3O15049 544 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 XYLBO75191 536 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 GADD45BO75293 160 aaPredicted RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 B3GAT3O94766 335 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ABLIM3O94929 683 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 PRKCBP05771 671 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 CD46P15529 392 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 LIG1P18858 919 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ATP2B1P20020 1258 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 KRT2P35908 639 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 RPS9P46781 194 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 PFKPQ01813 784 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 DMWDQ09019 674 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 PRPF4BQ13523 1007 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 GAS6Q14393 721 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ECM1Q16610 540 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 UPP1Q16831 310 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 FAM78AQ5JUQ0 283 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 CCDC183Q5T5S1 534 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ZMAT2Q96NC0 199 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 NAP1L4Q99733 375 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ORC3Q9UBD5 711 aaPredicted RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 CFAP45Q9UL16 551 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 NDRG2Q9UN36 371 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 BACE2Q9Y5Z0 518 aa9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-208ENST00000529608 ARHGEF37A1IGU5 675 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 NEMFO60524 1076 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 JAK2O60674 1132 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 GJA1P17302 382 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 PTPN2P17706 415 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 GCGRP47871 477 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 SPEM2Q0P670 501 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ELAVL2Q12926 359 aaKnown RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 SRSF5Q13243 272 aaKnown RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 SLC8B1Q6J4K2 584 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 VITQ6UXI7 678 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ZBTB8OSQ8IWT0 167 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ELSPBP1Q96BH3 223 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 RSPRY1Q96DX4 576 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 CCDC43Q96MW1 224 aaKnown RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ZNF396Q96N95 335 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 C2orf42Q9NWW7 574 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 USP18Q9UMW8 372 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 ANK1P16157 1881 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 CITO14578 2027 aa9.36□□□□□ -0.91
TGFBR3-208ENST00000529608 SMIM28A0A1B0GU29 152 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 SYCE3A1L190 88 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ARNTLO00327 626 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CDKL5O76039 1030 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 VNN2O95498 520 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 XBP1P17861 261 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CYP11B2P19099 503 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CLCN1P35523 988 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 VIPR2P41587 438 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 MAGEA9P43362 315 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 NAMPTP43490 491 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ARPP19P56211 112 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 OSTNP61366 133 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 SATB1Q01826 763 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CCDC173Q0VFZ6 552 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 RESTQ13127 1097 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 MRPL58Q14197 206 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 MAPK6Q16659 721 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 XKR4Q5GH76 650 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ALKAL1Q6UXT8 129 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ZNF852Q6ZMS4 543 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 DIS3L2Q8IYB7 885 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 MCPH1Q8NEM0 835 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ZNF461Q8TAF7 563 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 DNASE1L2Q92874 299 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ASB16Q96NS5 453 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 NELL2Q99435 816 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 TUFT1Q9NNX1 390 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 CEP72Q9P209 647 aa9.35□□□□□ -0.91
TGFBR3-208ENST00000529608 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
TGFBR3-208ENST00000529608 NUP210Q8TEM1 1887 aaPredicted RBP9.34□□□□□ -0.91
TGFBR3-208ENST00000529608 EML5Q05BV3 1969 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms