RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ADAM28Q9UKQ2 775 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 RWDD3Q9Y3V2 267 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 NUB1Q9Y5A7 615 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 PCDHB12Q9Y5F1 795 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
CAPN1-217ENST00000529133 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 TADA2AO75478 443 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 EFEMP2O95967 443 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 SLC9A1P19634 815 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 PAX3P23760 479 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 DNAJB2P25686 324 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 KLK7P49862 253 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 ERVK-21P61565 698 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 APBA1Q02410 837 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 LRMPQ12912 555 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 ZNF667Q5HYK9 610 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 TIFAQ96CG3 184 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 SUSD3Q96L08 255 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 SAMD11Q96NU1 681 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
CAPN1-217ENST00000529133 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
CAPN1-217ENST00000529133 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 GDAP2Q9NXN4 497 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
CAPN1-217ENST00000529133 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 POLIQ9UNA4 740 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
CAPN1-217ENST00000529133 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 C5orf67F2Z3F1 127 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 M0QZQ0 153 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 CYB561D2O14569 222 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 CBFA2T2O43439 604 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 FGF18O76093 207 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 PBX1P40424 430 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 ASPAP45381 313 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 TNNC1P63316 161 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 PLCB3Q01970 1234 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 WDR72Q3MJ13 1102 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 WDR44Q5JSH3 913 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 ARHGEF19Q8IW93 802 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 RNF168Q8IYW5 571 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-217ENST00000529133 KLHL23Q8NBE8 558 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 TATDN2Q93075 761 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 TMEM169Q96HH4 297 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 SENP8Q96LD8 212 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 GPR62Q9BZJ7 368 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 SF3B1O75533 1304 aaKnown RBP eCLIP12.29□□□□□ -0.44
CAPN1-217ENST00000529133 GBF1Q92538 1859 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 TRIP11Q15643 1979 aa12.29□□□□□ -0.44
CAPN1-217ENST00000529133 TRAPPC3O43617 180 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 RB1P06400 928 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 TPM3P06753 285 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 ODC1P11926 461 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 ZNF75DP51815 510 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 FAM171A1Q5VUB5 890 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 PHLDB3Q6NSJ2 640 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 GJB7Q6PEY0 223 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 DDX53Q86TM3 631 aaKnown RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 TOP6BLQ8N6T0 577 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 C11orf84Q9BUA3 381 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 HERC2P3Q9BVR0 1158 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 TRIM5Q9C035 493 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 SDCBP2Q9H190 292 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 GANQ9H2C0 597 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 SMYD3Q9H7B4 428 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 SLC28A3Q9HAS3 691 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 APEX2Q9UBZ4 518 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-217ENST00000529133 L1RE1Q9UN81 338 aa12.28□□□□□ -0.44
CAPN1-217ENST00000529133 SYN3O14994 580 aa12.27□□□□□ -0.45
CAPN1-217ENST00000529133 EPHB6O15197 1021 aa12.27□□□□□ -0.45
CAPN1-217ENST00000529133 HUS1O60921 280 aa12.27□□□□□ -0.45
CAPN1-217ENST00000529133 NOL4O94818 638 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms