RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 EPHB4P54760 987 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 MFAP3P55082 362 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 BPIFB4P59827 614 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 LILRA4P59901 499 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 DLG4P78352 724 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 UBXN1Q04323 297 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 BIRC3Q13489 604 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 SHHQ15465 462 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 TCTN1Q2MV58 587 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZNF667Q5HYK9 610 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZBTB41Q5SVQ8 909 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 TDRD10Q5VZ19 366 aaKnown RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 PPP1R2P3Q6NXS1 205 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 TRIM65Q6PJ69 517 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 DDX53Q86TM3 631 aaKnown RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 GAS2L3Q86XJ1 694 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 DRC7Q8IY82 874 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 TMEM192Q8IY95 271 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 RNF168Q8IYW5 571 aaPredicted RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 LMO3Q8TAP4 145 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZNF516Q92618 1163 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 SYN2Q92777 582 aaPredicted RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 HPDLQ96IR7 371 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 SUSD3Q96L08 255 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 CEP295NLQ96MC4 621 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZFP42Q96MM3 310 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ZNF558Q96NG5 402 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 NT5C1BQ96P26 610 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 BCO2Q9BYV7 579 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 MTMR12Q9C0I1 747 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 XYLT2Q9H1B5 865 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 CWH43Q9H720 699 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 NRDE2Q9H7Z3 1164 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 GRPEL1Q9HAV7 217 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.68□□□□□ -1.34
MACF1-228ENST00000528611 MIOSQ9NXC5 875 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 SPG21Q9NZD8 308 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 PUF60Q9UHX1 559 aaKnown RBP6.68□□□□□ -1.34
MACF1-228ENST00000528611 MSRAQ9UJ68 235 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 ADAM28Q9UKQ2 775 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 CNTN6Q9UQ52 1028 aa6.68□□□□□ -1.34
MACF1-228ENST00000528611 SF3B1O75533 1304 aaKnown RBP eCLIP6.68□□□□□ -1.34
MACF1-228ENST00000528611 GOLGA6L6A8MZA4 724 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 H7C4K7 107 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 NRP1O14786 923 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 HUS1O60921 280 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 B3GAT3O94766 335 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 OAZ2O95190 189 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 POMCP01189 267 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 HLA-DRAP01903 254 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ITGB3P05106 788 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 FGFR1P11362 822 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ODC1P11926 461 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ATP1A3P13637 1013 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 PON1P27169 355 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ANXA13P27216 316 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 BMPR1AP36894 532 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 PIK3CAP42336 1068 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 GCLMP48507 274 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 CLCNKBP51801 687 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ERVK-21P61565 698 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 TNNC1P63316 161 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 DEFB103AP81534 67 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ARID5BQ14865 1188 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 STILQ15468 1287 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 MAPRE1Q15691 268 aaKnown RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 ZNF699Q32M78 642 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 USP41Q3LFD5 358 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 WDR72Q3MJ13 1102 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 CBWD6Q4V339 395 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 SEZ6Q53EL9 994 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 CBWD3Q5JTY5 395 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 CBWD5Q5RIA9 395 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 SPECC1LQ69YQ0 1117 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 FAM109BQ6ICB4 259 aaPredicted RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 KCNT2Q6UVM3 1135 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 METTL23Q86XA0 190 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 SLC39A11Q8N1S5 342 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 RNF169Q8NCN4 708 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 OR5B17Q8NGF7 314 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 PLEKHO2Q8TD55 490 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 C2orf15Q8WU43 125 aaKnown RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 LPPQ93052 612 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 TMEM169Q96HH4 297 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 IGSF21Q96ID5 467 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 TGS1Q96RS0 853 aaKnown RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 ACBD6Q9BR61 282 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 C11orf84Q9BUA3 381 aaPredicted RBP6.67□□□□□ -1.34
MACF1-228ENST00000528611 APOL6Q9BWW8 343 aa6.67□□□□□ -1.34
MACF1-228ENST00000528611 STK33Q9BYT3 514 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms