RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRMT10CQ7L0Y3 403 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 RBM46Q8TBY0 533 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 ZFAND2BQ8WV99 257 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 TMEM117Q9H0C3 514 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 TOPORSQ9NS56 1045 aaPredicted RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 HSPBP1Q9NZL4 362 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 BTNL10A8MVZ5 291 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 P4HBP07237 508 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 GYS1P13807 737 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 SKIV2L2P42285 1042 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 TNFAIP1Q13829 316 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 PARP6Q2NL67 630 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 RC3H1Q5TC82 1133 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 VSTM1Q6UX27 236 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 CBWD2Q8IUF1 395 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 C4orf33Q8N1A6 199 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 KRT35Q92764 455 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 GRHL1Q9NZI5 618 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 SUGT1Q9Y2Z0 365 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 TROVE2P10155 538 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 16.6
LTBP3-210ENST00000528516 HSPA6P17066 643 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 MARCKSL1P49006 195 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 KHDC1Q4VXA5 237 aaKnown RBP18.88■□□□□ 0.61
LTBP3-210ENST00000528516 WASHC2DQ5SRD0 308 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 ZBTB8OSQ8IWT0 167 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 ARHGEF26Q96DR7 871 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 TTC1Q99614 292 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 CENPKQ9BS16 269 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 AKT3Q9Y243 479 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 ANKRD63C9JTQ0 380 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
LTBP3-210ENST00000528516 GM2AP17900 193 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 KRT17Q04695 432 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 MCL1Q07820 350 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 MGAT5Q09328 741 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 GIT2Q14161 759 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 SPARCL1Q14515 664 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 OR6B2Q6IFH4 312 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
LTBP3-210ENST00000528516 BCAS3Q9H6U6 928 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 EML1O00423 815 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 PLS3P13797 630 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 YWHABP31946 246 aaKnown RBP18.87■□□□□ 0.61
LTBP3-210ENST00000528516 GPS1Q13098 491 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 RRP1BQ14684 758 aaKnown RBP18.87■□□□□ 0.61
LTBP3-210ENST00000528516 KIF22Q14807 665 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 SGSM1Q2NKQ1 1148 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 PRELID2Q8N945 189 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 GRK7Q8WTQ7 553 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 HIC2Q96JB3 615 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 SUDS3Q9H7L9 328 aaPredicted RBP18.87■□□□□ 0.61
LTBP3-210ENST00000528516 INPP5FQ9Y2H2 1132 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 TNNC2P02585 160 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 INHBAP08476 426 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 KITP10721 976 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 CCNB1P14635 433 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 ORC1Q13415 861 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 DCAF12L1Q5VU92 463 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 TTLL6Q8N841 843 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 CCNYQ8ND76 341 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 MIPOL1Q8TD10 442 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 TRAPPC9Q96Q05 1148 aa18.87■□□□□ 0.61
LTBP3-210ENST00000528516 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 FAM47DPA6NHR8 397 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 OAS1P00973 400 aaKnown RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 CCNG1P51959 295 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 KPNB1Q14974 876 aaKnown RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 ACBD5Q5T8D3 534 aaPredicted RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 RFWD3Q6PCD5 774 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 LRRC74BQ6ZQY2 392 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 MTDHQ86UE4 582 aaKnown RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 KAT5Q92993 513 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 CFAP36Q96G28 342 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 TXLNGYQ9BZA5 131 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 FAM49AQ9H0Q0 323 aaPredicted RBP18.86■□□□□ 0.61
LTBP3-210ENST00000528516 GALNT8Q9NY28 637 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 CHKBQ9Y259 395 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 MTMR2Q13614 643 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 ECM1Q16610 540 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 CCDC33Q8N5R6 958 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 SEC14L1Q92503 715 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 PWWP2AQ96N64 755 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 MPP2Q14168 576 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 SMTNL2Q2TAL5 461 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 KCTD6Q8NC69 237 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 PYROXD1Q8WU10 500 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 KCNH7Q9NS40 1196 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 PDP2Q9P2J9 529 aa18.86■□□□□ 0.61
LTBP3-210ENST00000528516 GRAP2O75791 330 aa18.85■□□□□ 0.61
LTBP3-210ENST00000528516 PIAS1O75925 651 aa18.85■□□□□ 0.61
LTBP3-210ENST00000528516 COILP38432 576 aaPredicted RBP18.85■□□□□ 0.61
LTBP3-210ENST00000528516 OVGP1Q12889 678 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms