RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TCEAL8Q8IYN2 117 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 ELMOD1Q8N336 334 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 C3orf58Q8NDZ4 430 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 SLC7A14Q8TBB6 771 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 KCNK12Q9HB15 430 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 KIAA1586Q9HCI6 787 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 AVENQ9NQS1 362 aaPredicted RBP10.41□□□□□ -0.74
CHD7-208ENST00000528280 CDH22Q9UJ99 828 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 FBXL5Q9UKA1 691 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 R3HCC1Q9Y3T6 440 aaKnown RBP10.41□□□□□ -0.74
CHD7-208ENST00000528280 TRIP11Q15643 1979 aa10.41□□□□□ -0.74
CHD7-208ENST00000528280 DMXL1Q9Y485 3027 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 H0Y858 1186 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 I3L4J1 428 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 PIRO00625 290 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 MEFVO15553 781 aaPredicted RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 ADAM12O43184 909 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 MICAL2O94851 1124 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 MYBP10242 640 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 ODC1P11926 461 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 PNPLA4P41247 253 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 AARSP49588 968 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHD7-208ENST00000528280 VCPP55072 806 aaKnown RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 ARPP19P56211 112 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 LILRA4P59901 499 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 SMARCB1Q12824 385 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 MYBPC2Q14324 1141 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 JADE1Q6IE81 842 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 IQCEQ6IPM2 695 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 SLC39A4Q6P5W5 647 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 MTSS1LQ765P7 747 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 GRASPQ7Z6J2 395 aaPredicted RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 CEP57L1Q8IYX8 460 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 THEM5Q8N1Q8 247 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 LEMD2Q8NC56 503 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 DHX58Q96C10 678 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 ASIC4Q96FT7 647 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 ZNF512Q96ME7 567 aaPredicted RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 MFSD1Q9H3U5 465 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 CYP4F11Q9HBI6 524 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 TBC1D7Q9P0N9 293 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 CGNQ9P2M7 1197 aaKnown RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 WNT16Q9UBV4 365 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 TUBGCP4Q9UGJ1 667 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 AFF4Q9UHB7 1163 aaKnown RBP10.4□□□□□ -0.74
CHD7-208ENST00000528280 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 PCDHA7Q9UN72 937 aa10.4□□□□□ -0.74
CHD7-208ENST00000528280 TPRP12270 2363 aaKnown RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 MYO10Q9HD67 2058 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 A0A087X0B3 334 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 MED19A0JLT2 244 aaPredicted RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 ANO9A1A5B4 782 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 EIF3DO15371 548 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHD7-208ENST00000528280 CCL16O15467 120 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 EXTL3O43909 919 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 MYL1P05976 194 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 ASGR2P07307 311 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 IGFBP6P24592 240 aaPredicted RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 ADSSP30520 456 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 NBL1P41271 181 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 CLCN5P51795 746 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 ROR1Q01973 937 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 SPAG1Q07617 926 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 PLD1Q13393 1074 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 BECN1Q14457 450 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 E2F4Q16254 413 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 PABPC1LQ4VXU2 614 aaKnown RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 C9orf57Q5W0N0 161 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 SHC4Q6S5L8 630 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 SLC44A3Q8N4M1 653 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 ZNF507Q8TCN5 953 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 FOXD4L4Q8WXT5 416 aaPredicted RBP10.39□□□□□ -0.75
CHD7-208ENST00000528280 FAM213AQ9BRX8 229 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 TRIM9Q9C026 710 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 GDE1Q9NZC3 331 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 HSFX1Q9UBD0 423 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
CHD7-208ENST00000528280 WDR27A2RRH5 827 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ZNF233A6NK53 670 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 CYP11A1P05108 521 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 SLFN14P0C7P3 912 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 CPB1P15086 417 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 CMA1P23946 247 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ALDH1A3P47895 512 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 TAF6P49848 677 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ASIC1P78348 528 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 KRT85P78386 507 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ADCY1Q08828 1119 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 PSMD2Q13200 908 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms