RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 NCAM2O15394 837 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 LAMTOR5O43504 91 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 OAZ2O95190 189 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 GRM2Q14416 872 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 ENOX2Q16206 610 aaKnown RBP24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 FAM78AQ5JUQ0 283 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 POTEHQ6S545 545 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 ZNF852Q6ZMS4 543 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 RAD54LQ92698 747 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 HINFPQ9BQA5 517 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 TRMT61BQ9BVS5 477 aaKnown RBP24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 OXCT2Q9BYC2 517 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 OSBPL6Q9BZF3 934 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 LTB4R2Q9NPC1 389 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 ASAH2Q9NR71 780 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 HEBP1Q9NRV9 189 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 BLOC1S4Q9NUP1 217 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 CEP72Q9P209 647 aa24.32■■□□□ 1.48
TRAPPC4-208ENST00000527680 MICAL2O94851 1124 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 OR4Q2P0C623 313 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 GJA1P17302 382 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 CCR2P41597 374 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 GRIN1Q05586 938 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 BEST2Q8NFU1 509 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 TSPAN18Q96SJ8 248 aa24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 MRPS17Q9Y2R5 130 aaKnown RBP24.31■■□□□ 1.48
TRAPPC4-208ENST00000527680 VPS37CA5D8V6 355 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 TULP1O00294 542 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 NMT1P30419 496 aaKnown RBP24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 DDIT3P35638 169 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 DUSP4Q13115 394 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 ARMCX5Q6P1M9 558 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 CD302Q8IX05 232 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 KRI1Q8N9T8 703 aaKnown RBP24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 LEMD2Q8NC56 503 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 LRRC15Q8TF66 581 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 ZSWIM3Q96MP5 696 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 SLITRK6Q9H5Y7 841 aa24.3■■□□□ 1.48
TRAPPC4-208ENST00000527680 A0A0B4J269 797 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 OR6C75A6NL08 312 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 PIGRP01833 764 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 ABCD1P33897 745 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 ALDH1A3P47895 512 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 ZNF131P52739 623 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 EPHB3P54753 998 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 CSTF1Q05048 431 aaKnown RBP24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 SPATA1Q5VX52 437 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 OVOS1Q6IE37 1185 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 JADE1Q6IE81 842 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 LARP4BQ92615 738 aaKnown RBP24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 SMARCD2Q92925 531 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 KCNN1Q92952 543 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 ASB16Q96NS5 453 aa24.29■■□□□ 1.48
TRAPPC4-208ENST00000527680 COL4A3Q01955 1670 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 TARSP26639 723 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 GDI1P31150 447 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 MAGEA9P43362 315 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 ACOT2P49753 483 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 LILRA4P59901 499 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 GTF2BQ00403 316 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 GPR17Q13304 367 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 PLD1Q13393 1074 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 ADALQ6DHV7 355 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 IRF7Q92985 503 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 CPSF3Q9UKF6 684 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 SLC27A5Q9Y2P5 690 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 YIPF1Q9Y548 306 aa24.28■■□□□ 1.48
TRAPPC4-208ENST00000527680 FAM189A1O60320 539 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 ODC1P11926 461 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 PSMC3P17980 439 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 TYMPP19971 482 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 FCARP24071 287 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 VIPR2P41587 438 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 AARSP49588 968 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 TMEM132DQ14C87 1099 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 TEAD2Q15562 447 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 ZC2HC1CQ53FD0 456 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 SLFN12LQ6IEE8 588 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 MAML2Q8IZL2 1156 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 ZSCAN18Q8TBC5 510 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 DNASE1L2Q92874 299 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 SENP8Q96LD8 212 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 CCSER1Q9C0I3 900 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 GPR88Q9GZN0 384 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 CCDC39Q9UFE4 941 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 FBXO4Q9UKT5 387 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 NDRG2Q9UN36 371 aaKnown RBP24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 DMDP11532 3685 aa24.27■■□□□ 1.48
TRAPPC4-208ENST00000527680 SPTBN4Q9H254 2564 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 ANKRD63C9JTQ0 380 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 MAN2B1O00754 1011 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 PPEF2O14830 753 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 KINO60870 393 aaKnown RBP24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 ADRB2P07550 413 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 ID4P47928 161 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 C9orf57Q5W0N0 161 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 SLC39A4Q6P5W5 647 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 DYMQ7RTS9 669 aa24.26■■□□□ 1.47
TRAPPC4-208ENST00000527680 ATRIPQ8WXE1 791 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms