RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 EPM2AIP1Q7L775 607 aaPredicted RBP22.82■■□□□ 1.24
PKP3-205ENST00000527442 SMYD4Q8IYR2 804 aaPredicted RBP22.82■■□□□ 1.24
PKP3-205ENST00000527442 SHDQ96IW2 340 aa22.82■■□□□ 1.24
PKP3-205ENST00000527442 FGFBP2Q9BYJ0 223 aa22.82■■□□□ 1.24
PKP3-205ENST00000527442 SLC39A2Q9NP94 309 aa22.82■■□□□ 1.24
PKP3-205ENST00000527442 PARP2Q9UGN5 583 aa22.82■■□□□ 1.24
PKP3-205ENST00000527442 EIF3DO15371 548 aaKnown RBP eCLIP22.81■■□□□ 1.24
PKP3-205ENST00000527442 PPP1R37O75864 691 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 SCP2P22307 547 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 NAMPTP43490 491 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 PEX3P56589 373 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 BMT2Q1RMZ1 405 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 GUF1Q8N442 669 aaKnown RBP22.81■■□□□ 1.24
PKP3-205ENST00000527442 IFT74Q96LB3 600 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 CLSTN3Q9BQT9 956 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 NTPCRQ9BSD7 190 aaKnown RBP22.81■■□□□ 1.24
PKP3-205ENST00000527442 DDX23Q9BUQ8 820 aaKnown RBP22.81■■□□□ 1.24
PKP3-205ENST00000527442 STRA6Q9BX79 667 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 DNAJC25Q9H1X3 360 aa22.81■■□□□ 1.24
PKP3-205ENST00000527442 MRPL44Q9H9J2 332 aaKnown RBP22.81■■□□□ 1.24
PKP3-205ENST00000527442 KANSL1LA0AUZ9 987 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 PPP1R3GB7ZBB8 358 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 KIF4AO95239 1232 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 C8AP07357 584 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 HNRNPA1P09651 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
PKP3-205ENST00000527442 CD44P16070 742 aaKnown RBP22.8■■□□□ 1.24
PKP3-205ENST00000527442 PRCPP42785 496 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 NPTX2P47972 431 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 MLF2Q15773 248 aaPredicted RBP22.8■■□□□ 1.24
PKP3-205ENST00000527442 PSMD5Q16401 504 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 LIN9Q5TKA1 542 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 STXBP4Q6ZWJ1 553 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 ITFG1Q8TB96 612 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 PIK3R5Q8WYR1 880 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 FGF13Q92913 245 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 BPIFA3Q9BQP9 254 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 NFKBIZQ9BYH8 718 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 SPATA6Q9NWH7 488 aaPredicted RBP22.8■■□□□ 1.24
PKP3-205ENST00000527442 TBC1D7Q9P0N9 293 aa22.8■■□□□ 1.24
PKP3-205ENST00000527442 MTF2Q9Y483 593 aaPredicted RBP22.8■■□□□ 1.24
PKP3-205ENST00000527442 A0A1B0GUA9 196 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 CASTOR2A6NHX0 329 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 H0YCG3 227 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 K7ENM7 598 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 CCL16O15467 120 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 ADAM12O43184 909 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 KIF20AO95235 890 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 ABCD1P33897 745 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 CASP5P51878 434 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 SMTNP53814 917 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 TUSC3Q13454 348 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 STIM1Q13586 685 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 UBXN2BQ14CS0 331 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 PPM1LQ5SGD2 360 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 MTSS1LQ765P7 747 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 ZNF720Q7Z2F6 126 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 GLIS3Q8NEA6 775 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 LNX1Q8TBB1 728 aaPredicted RBP22.79■■□□□ 1.24
PKP3-205ENST00000527442 SCFD1Q8WVM8 642 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 HVCN1Q96D96 273 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 TTPALQ9BTX7 342 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 NAT10Q9H0A0 1025 aaKnown RBP22.79■■□□□ 1.24
PKP3-205ENST00000527442 ARHGAP28Q9P2N2 729 aa22.79■■□□□ 1.24
PKP3-205ENST00000527442 GCNT3O95395 438 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 ERCC5P28715 1186 aaPredicted RBP22.78■■□□□ 1.24
PKP3-205ENST00000527442 NMT1P30419 496 aaKnown RBP22.78■■□□□ 1.24
PKP3-205ENST00000527442 RSPO4Q2I0M5 234 aaPredicted RBP22.78■■□□□ 1.24
PKP3-205ENST00000527442 ZNF528Q3MIS6 628 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 FAM171A1Q5VUB5 890 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 CDCA2Q69YH5 1023 aaPredicted RBP22.78■■□□□ 1.24
PKP3-205ENST00000527442 CEP57Q86XR8 500 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 TMEM161BQ8NDZ6 487 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 KXD1Q9BQD3 176 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 BCO2Q9BYV7 579 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 CXCL16Q9H2A7 254 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 KMT5AQ9NQR1 393 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 POLIQ9UNA4 740 aa22.78■■□□□ 1.24
PKP3-205ENST00000527442 PTGESO14684 152 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 PSMA7O14818 248 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 LAMTOR5O43504 91 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 HOXA9P31269 272 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 ZNF165P49910 485 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 GTF2BQ00403 316 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 PRKCQQ04759 706 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 SLC44A4Q53GD3 710 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 FOXR2Q6PJQ5 311 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 HAUS6Q7Z4H7 955 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 ZNF507Q8TCN5 953 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 FAM200AQ8TCP9 573 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 DHTKD1Q96HY7 919 aaPredicted RBP22.77■■□□□ 1.24
PKP3-205ENST00000527442 HCFC1R1Q9NWW0 138 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 FBXO4Q9UKT5 387 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 PCDHB13Q9Y5F0 798 aa22.77■■□□□ 1.24
PKP3-205ENST00000527442 CCDC169A6NNP5 214 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 SLC16A4O15374 487 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 CD72P21854 359 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 PAK1Q13153 545 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 GAS2L3Q86XJ1 694 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 SLC7A14Q8TBB6 771 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 LTB4R2Q9NPC1 389 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms