RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 GPR161Q8N6U8 529 aaKnown RBP20.45■□□□□ 0.86
CAPN1-206ENST00000526966 ZNF512Q96ME7 567 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-206ENST00000526966 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 KCNG1Q9UIX4 513 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 TSC2P49815 1807 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 NCANO14594 1321 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 CPB1P15086 417 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 LRPAP1P30533 357 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPN1-206ENST00000526966 RSPO4Q2I0M5 234 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-206ENST00000526966 DTHD1Q6ZMT9 781 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 RNF19BQ6ZMZ0 732 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 KCTD17Q8N5Z5 321 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 KCNN1Q92952 543 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 HAPLN2Q9GZV7 340 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 PLEKHA5Q9HAU0 1116 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 ASAH2Q9NR71 780 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 NDRG2Q9UN36 371 aaKnown RBP20.44■□□□□ 0.86
CAPN1-206ENST00000526966 YIPF1Q9Y548 306 aa20.44■□□□□ 0.86
CAPN1-206ENST00000526966 TTC26A0AVF1 554 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 ARNTLO00327 626 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 OAZ2O95190 189 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 VNN2O95498 520 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 CXCL8P10145 99 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 GDI1P31150 447 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 SMTNP53814 917 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 YWHAHQ04917 246 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-206ENST00000526966 ZBTB6Q15916 424 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 TMEM130Q8N3G9 435 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 SYT2Q8N9I0 419 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-206ENST00000526966 ZSCAN18Q8TBC5 510 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-206ENST00000526966 PNMA5Q96PV4 448 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 KIF2CQ99661 725 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 OXCT2Q9BYC2 517 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-206ENST00000526966 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.43■□□□□ 0.86
CAPN1-206ENST00000526966 PIAS3Q9Y6X2 628 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 EPG5Q9HCE0 2579 aa20.43■□□□□ 0.86
CAPN1-206ENST00000526966 CLDN3O15551 220 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 MYL4P12829 197 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 GJA1P17302 382 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 VIPR2P41587 438 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 SLC12A3P55017 1021 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 ATP2C1P98194 919 aaPredicted RBP20.42■□□□□ 0.86
CAPN1-206ENST00000526966 RAD51AP2Q09MP3 1159 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 MFSD6LQ8IWD5 586 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 SHKBP1Q8TBC3 707 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 FAM3CQ92520 227 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 SECISBP2LQ93073 1101 aaKnown RBP20.42■□□□□ 0.86
CAPN1-206ENST00000526966 LRRC3Q9BY71 257 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 GPR88Q9GZN0 384 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 CACNA1BQ00975 2339 aa20.42■□□□□ 0.86
CAPN1-206ENST00000526966 CLTAP09496 248 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 CYP3A5P20815 502 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 TGM1P22735 817 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 MARCKSP29966 332 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-206ENST00000526966 MLLT6P55198 1093 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-206ENST00000526966 TEAD2Q15562 447 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 TMC8Q8IU68 726 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 E2F7Q96AV8 911 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 CRISPLD1Q9H336 500 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 UBQLN1Q9UMX0 589 aaKnown RBP20.41■□□□□ 0.86
CAPN1-206ENST00000526966 ACACBO00763 2458 aa20.41■□□□□ 0.86
CAPN1-206ENST00000526966 ZNF263O14978 683 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 SDHBP21912 280 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 CCR3P51677 355 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 NRLP54845 237 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 NCKAP1LP55160 1127 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 SPAG1Q07617 926 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 PLD1Q13393 1074 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 RALGAPA1Q6GYQ0 2036 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 RSPRY1Q96DX4 576 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 KIF12Q96FN5 646 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 LMAN1LQ9HAT1 526 aa20.4■□□□□ 0.86
CAPN1-206ENST00000526966 KIF26AQ9ULI4 1882 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-206ENST00000526966 TIMM13Q9Y5L4 95 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-206ENST00000526966 SCN1AP35498 2009 aa20.39■□□□□ 0.86
CAPN1-206ENST00000526966 OR6C75A6NL08 312 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 HEPACAM2A8MVW5 462 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 H0YCG3 227 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 FAM189A1O60320 539 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 OR4Q2P0C623 313 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 CHRNB1P11230 501 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 TNFSF9P41273 254 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 LMNB2Q03252 620 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 FCHO2Q0JRZ9 810 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 GPR17Q13304 367 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 PPP2R5DQ14738 602 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 ZRSR1Q15695 479 aaKnown RBP20.39■□□□□ 0.85
CAPN1-206ENST00000526966 TMEM119Q4V9L6 283 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 MSANTD3Q96H12 275 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 LARSQ9P2J5 1176 aaKnown RBP20.39■□□□□ 0.85
CAPN1-206ENST00000526966 DENND4CQ5VZ89 1909 aa20.39■□□□□ 0.85
CAPN1-206ENST00000526966 A0A1W2PRU2 124 aa20.38■□□□□ 0.85
CAPN1-206ENST00000526966 PRR5-ARHGAP8B1AHC4 643 aa20.38■□□□□ 0.85
CAPN1-206ENST00000526966 ADRB2P07550 413 aa20.38■□□□□ 0.85
CAPN1-206ENST00000526966 PLA2G4BP0C869 781 aa20.38■□□□□ 0.85
CAPN1-206ENST00000526966 TYMPP19971 482 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms