RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 LILRA4P59901 499 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 EHHADHQ08426 723 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 EPM2AIP1Q7L775 607 aaPredicted RBP22.32■■□□□ 1.16
VPS28-206ENST00000526734 TCEAL8Q8IYN2 117 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 CACTINQ8WUQ7 758 aaKnown RBP22.32■■□□□ 1.16
VPS28-206ENST00000526734 IKZF4Q9H2S9 585 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 KIAA1586Q9HCI6 787 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 RBAKQ9NYW8 714 aaPredicted RBP22.32■■□□□ 1.16
VPS28-206ENST00000526734 AFF4Q9UHB7 1163 aaKnown RBP22.32■■□□□ 1.16
VPS28-206ENST00000526734 DSEQ9UL01 958 aa22.32■■□□□ 1.16
VPS28-206ENST00000526734 C2orf16Q68DN1 1984 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 WDR27A2RRH5 827 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 PRRG1O14668 218 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 FSHRP23945 695 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 PNPLA4P41247 253 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 GUCY2FP51841 1108 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 GPD1LQ8N335 351 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 ZNF507Q8TCN5 953 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 SAAL1Q96ER3 474 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 ZNF560Q96MR9 790 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 CBWD1Q9BRT8 395 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 DPP3Q9NY33 737 aa22.31■■□□□ 1.16
VPS28-206ENST00000526734 LRG1P02750 347 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 CPB1P15086 417 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 PFKFB1P16118 471 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 TAF6P49848 677 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 MYBPC2Q14324 1141 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 SURF1Q15526 300 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 OVOS1Q6IE37 1185 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 GRASPQ7Z6J2 395 aaPredicted RBP22.3■■□□□ 1.16
VPS28-206ENST00000526734 EFCAB13Q8IY85 973 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 SENP8Q96LD8 212 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 KCNH6Q9H252 994 aa22.3■■□□□ 1.16
VPS28-206ENST00000526734 CGNQ9P2M7 1197 aaKnown RBP22.3■■□□□ 1.16
VPS28-206ENST00000526734 FAM237AA0A1B0GTK4 181 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 CCL16O15467 120 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 ACTN4O43707 911 aaKnown RBP22.29■■□□□ 1.16
VPS28-206ENST00000526734 CYP11A1P05108 521 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 ARPP19P56211 112 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 TDGQ13569 410 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 SV2CQ496J9 727 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 HFE2Q6ZVN8 426 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 GET4Q7L5D6 327 aaPredicted RBP22.29■■□□□ 1.16
VPS28-206ENST00000526734 HS2ST1Q7LGA3 356 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 CYP4F11Q9HBI6 524 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 AVENQ9NQS1 362 aaPredicted RBP22.29■■□□□ 1.16
VPS28-206ENST00000526734 SERTAD1Q9UHV2 236 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 POLIQ9UNA4 740 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 HPSEQ9Y251 543 aa22.29■■□□□ 1.16
VPS28-206ENST00000526734 A0A1W2PQ27 194 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 A0A1W2PQ64 194 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 A0A1W2PQD8 194 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 ZNF233A6NK53 670 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 PPEF2O14830 753 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 N4BP1O75113 896 aaKnown RBP22.28■■□□□ 1.16
VPS28-206ENST00000526734 ASGR2P07307 311 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 LAMP2P13473 410 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 AFMP43652 599 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 BMT2Q1RMZ1 405 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 METTL23Q86XA0 190 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 SUGP1Q8IWZ8 645 aaKnown RBP22.28■■□□□ 1.16
VPS28-206ENST00000526734 HPS3Q969F9 1004 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 PBXIP1Q96AQ6 731 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 ASIC4Q96FT7 647 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 MYADMQ96S97 322 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 KCNK12Q9HB15 430 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 ITGA11Q9UKX5 1188 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 CDH7Q9ULB5 785 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 INSL5Q9Y5Q6 135 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 TECTAO75443 2155 aa22.28■■□□□ 1.16
VPS28-206ENST00000526734 NUCB2P80303 420 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 TFAMQ00059 246 aaKnown RBP22.27■■□□□ 1.16
VPS28-206ENST00000526734 PSMD2Q13200 908 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 CUL4BQ13620 913 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 PABPC1LQ4VXU2 614 aaKnown RBP22.27■■□□□ 1.16
VPS28-206ENST00000526734 ELMOD1Q8N336 334 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 GLIS3Q8NEA6 775 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 GOLGA5Q8TBA6 731 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 PCIF1Q9H4Z3 704 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 AGPAT3Q9NRZ7 376 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 EXOC1Q9NV70 894 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 HSPBP1Q9NZL4 362 aa22.27■■□□□ 1.16
VPS28-206ENST00000526734 TIMM13Q9Y5L4 95 aaPredicted RBP22.27■■□□□ 1.16
VPS28-206ENST00000526734 A0A1B0GVL5 298 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 GOLGA8IPA6NC78 632 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 GOLGA8JA6NMD2 632 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 SPTLC1O15269 473 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 PTPN2P17706 415 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 SYKP43405 635 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 ADCY1Q08828 1119 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 GPR17Q13304 367 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 PLD1Q13393 1074 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 FBXL6Q8N531 539 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 LEMD2Q8NC56 503 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 SCFD1Q8WVM8 642 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 PAGE5Q96GU1 130 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 CCDC34Q96HJ3 373 aa22.26■■□□□ 1.15
VPS28-206ENST00000526734 HSFX1Q9UBD0 423 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms