RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 AGAP1Q9UPQ3 857 aa17.53■□□□□ 0.4
SSSCA1-202ENST00000526433 TIMM13Q9Y5L4 95 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-202ENST00000526433 CDY1Q9Y6F8 540 aa17.53■□□□□ 0.4
SSSCA1-202ENST00000526433 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 CALUO43852 315 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 TBC1D4O60343 1298 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 NR3C1P04150 777 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 ITGB3P05106 788 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 ITIH3Q06033 890 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 MYBPC2Q14324 1141 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 PSMD6Q15008 389 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 DUOXA2Q1HG44 320 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 SCARA3Q6AZY7 606 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 CES5AQ6NT32 575 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 ELMSAN1Q6PJG2 1045 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 TMC5Q6UXY8 1006 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 SMYD4Q8IYR2 804 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 C1orf127Q8N9H9 656 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 KREMEN2Q8NCW0 462 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 OR5B17Q8NGF7 314 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 SUSD6Q92537 303 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 CCDC127Q96BQ5 260 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 ANKRD36BP1Q96IX9 119 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 PLEKHA4Q9H4M7 779 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 TRAF3IP3Q9Y228 551 aa17.52■□□□□ 0.4
SSSCA1-202ENST00000526433 OAZ2O95190 189 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 TNNC2P02585 160 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 TMEM191BP0C7N4 346 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 DLATP10515 647 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 TNNI1P19237 187 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 POLR2BP30876 1174 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 TAF6P49848 677 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 CTXN3Q4LDR2 81 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 USP37Q86T82 979 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 CXorf38Q8TB03 319 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 BORCS6Q96GS4 357 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 FNBP1Q96RU3 617 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 MTMR12Q9C0I1 747 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 SFXN1Q9H9B4 322 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 PRKAG3Q9UGI9 489 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 CDH22Q9UJ99 828 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 FBXL5Q9UKA1 691 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 VCANP13611 3396 aa17.51■□□□□ 0.39
SSSCA1-202ENST00000526433 C5orf42Q9H799 3197 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 PTPRJQ12913 1337 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 BDP1A6H8Y1 2624 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 CCDC195A0A1B0GUA6 201 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 CYB561D2O14569 222 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 KRT19P08727 400 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 WEE2P0C1S8 567 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 TYMPP19971 482 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 PRCPP42785 496 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 CASP4P49662 377 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ARPP19P56211 112 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 RBP5P82980 135 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 YWHAHQ04917 246 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ATAT1Q5SQI0 421 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 SLC8B1Q6J4K2 584 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ZNF280DQ6N043 979 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 WDR49Q8IV35 697 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 FEZF2Q8TBJ5 459 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 CGRRF1Q99675 332 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 GTPBP4Q9BZE4 634 aaKnown RBP17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 SIX4Q9UIU6 781 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ITGA11Q9UKX5 1188 aa17.5■□□□□ 0.39
SSSCA1-202ENST00000526433 ARHGEF37A1IGU5 675 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 KPNA7A9QM74 516 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 RFPL2O75678 378 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ODC1P11926 461 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 PNPLA4P41247 253 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 MTHFRP42898 656 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 CBX2Q14781 532 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 NFIL3Q16649 462 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 SV2CQ496J9 727 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 TRAPPC11Q7Z392 1133 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 GPR149Q86SP6 731 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ADHFE1Q8IWW8 467 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 CMASQ8NFW8 434 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 PLEKHO2Q8TD55 490 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ZNF516Q92618 1163 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ZNF560Q96MR9 790 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 GZF1Q9H116 711 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 R3HCC1Q9Y3T6 440 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-202ENST00000526433 ZMYND10O75800 440 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 ABLIM3O94929 683 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 CYP11A1P05108 521 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 NR2F2P24468 414 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 RPL13P26373 211 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 ROR1Q01973 937 aa17.48■□□□□ 0.39
SSSCA1-202ENST00000526433 ZP2Q05996 745 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms