RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 INTUQ9ULD6 942 aa5.61□□□□□ -1.51
CSDE1-210ENST00000525878 AOX1Q06278 1338 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 GRM6O15303 877 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 ORC4O43929 436 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 SUN1O94901 812 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 MTHFD1P11586 935 aaKnown RBP5.6□□□□□ -1.51
CSDE1-210ENST00000525878 GPD1P21695 349 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 ANXA11P50995 505 aaKnown RBP5.6□□□□□ -1.51
CSDE1-210ENST00000525878 FPGSQ05932 587 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 TXNRD1Q16881 649 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 CT47A1Q5JQC4 288 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-210ENST00000525878 RNF219Q5W0B1 726 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-210ENST00000525878 TSHZ1Q6ZSZ6 1077 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 HASPINQ8TF76 798 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 COG1Q8WTW3 980 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 FBXL20Q96IG2 436 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 LRIG1Q96JA1 1093 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 ZNF778Q96MU6 729 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 KLHL32Q96NJ5 620 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 JKAMPQ9P055 326 aa5.6□□□□□ -1.51
CSDE1-210ENST00000525878 WASHC2AQ641Q2 1341 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 SLC43A1O75387 559 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 CELA2AP08217 269 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 POU3F3P20264 500 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-210ENST00000525878 CDC42EP1Q00587 391 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-210ENST00000525878 CD300EQ496F6 205 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-210ENST00000525878 FLYWCH1Q4VC44 716 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 ADGRG5Q8IZF4 528 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSDE1-210ENST00000525878 MYCBPAPQ8TBZ2 947 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 SLC29A3Q9BZD2 475 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-210ENST00000525878 ADAM21Q9UKJ8 722 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 CDYLQ9Y232 598 aa5.59□□□□□ -1.51
CSDE1-210ENST00000525878 PHLDB1Q86UU1 1377 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 SGTAO43765 313 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 ZNF81P51508 661 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 ZNF844Q08AG5 666 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 HLXQ14774 488 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-210ENST00000525878 INAVAQ3KP66 663 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 TSTD2Q5T7W7 516 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 KIAA1614Q5VZ46 1190 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 TDP1Q9NUW8 608 aa5.58□□□□□ -1.52
CSDE1-210ENST00000525878 CCDC195A0A1B0GUA6 201 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 MANSC4A6NHS7 340 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-210ENST00000525878 LINC00473A8K010 186 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 VWC2LB2RUY7 222 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 E7ENX8 843 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 PRKCGP05129 697 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 HNRNPMP52272 730 aaKnown RBP eCLIP5.57□□□□□ -1.52
CSDE1-210ENST00000525878 KRTAP10-9P60411 292 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-210ENST00000525878 MC2RQ01718 297 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 TAP2Q03519 686 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 FCRLBQ6BAA4 426 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 ZNF425Q6IV72 752 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 ZNF365Q70YC5 407 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 CFAP52Q8N1V2 620 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 PPM1NQ8N819 430 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 Q8N9P0 234 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-210ENST00000525878 RAB24Q969Q5 203 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 TMX3Q96JJ7 454 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 MRGPRX4Q96LA9 322 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 TUBD1Q9UJT1 453 aa5.57□□□□□ -1.52
CSDE1-210ENST00000525878 PPP3CBP16298 524 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 SSBP2P81877 361 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-210ENST00000525878 C9orf106Q8NAJ2 232 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 TOR1AIP2Q8NFQ8 470 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 SNX19Q92543 992 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 DMRTA2Q96SC8 542 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 FLRT1Q9NZU1 646 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 IPPQ9Y573 584 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 PCDHA13Q9Y5I0 950 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 WNT6Q9Y6F9 365 aa5.56□□□□□ -1.52
CSDE1-210ENST00000525878 PROB1E7EW31 1015 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 GCOM1H8Y6P7 765 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 NDUFS2O75306 463 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 CHRM2P08172 466 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 NXPH1P58417 271 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 ZNF280AP59817 542 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 TFF2Q03403 129 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 SDE2Q6IQ49 451 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 GIMAP6Q6P9H5 292 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 MIGA2Q7L4E1 593 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 AMIGO2Q86SJ2 522 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 AMOTL1Q8IY63 956 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 CBARPQ8N350 705 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 PDPRQ8NCN5 879 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 NSUN7Q8NE18 718 aaKnown RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 DDB2Q92466 427 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 JADE3Q92613 823 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 HDAC10Q969S8 669 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 PACSIN1Q9BY11 444 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 FAM126AQ9BYI3 521 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 KLC4Q9NSK0 619 aa5.55□□□□□ -1.52
CSDE1-210ENST00000525878 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
CSDE1-210ENST00000525878 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms