RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 SCN1AP35498 2009 aa16.82■□□□□ 0.28
RB1-205ENST00000525036 HIDE1A8MVS5 230 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 C2CD2LO14523 706 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 FSCN2O14926 492 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 TAF6P49848 677 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 KRT31Q15323 416 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 KIAA0319Q5VV43 1072 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 KRT39Q6A163 491 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
RB1-205ENST00000525036 APTXQ7Z2E3 356 aaKnown RBP16.81■□□□□ 0.28
RB1-205ENST00000525036 CEP57Q86XR8 500 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 SUSD3Q96L08 255 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 CDX2Q99626 313 aaPredicted RBP16.81■□□□□ 0.28
RB1-205ENST00000525036 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 APOBEC3GQ9HC16 384 aaKnown RBP16.81■□□□□ 0.28
RB1-205ENST00000525036 CHST7Q9NS84 486 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 LZTS1Q9Y250 596 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
RB1-205ENST00000525036 TRANK1O15050 2925 aa16.81■□□□□ 0.28
RB1-205ENST00000525036 M0QZQ0 153 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 LILRB3O75022 631 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 AFPP02771 609 aaKnown RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 SOD2P04179 222 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 FGFR3P22607 806 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 MXI1P50539 228 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 TRPC3Q13507 836 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 PLPP4Q5VZY2 271 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 ADGRD2Q7Z7M1 963 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 USP37Q86T82 979 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 GAS2L3Q86XJ1 694 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 RNF214Q8ND24 703 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 MYLIPQ8WY64 445 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 TLR9Q9NR96 1032 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 MTMR10Q9NXD2 777 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 SF3B1O75533 1304 aaKnown RBP eCLIP16.8■□□□□ 0.28
RB1-205ENST00000525036 CYB561D2O14569 222 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 HCRTO43612 131 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 CXCL14O95715 111 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 RPL17P18621 184 aaKnown RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 APBA1Q02410 837 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 WSCD1Q658N2 575 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 GPR153Q6NV75 609 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 RSPO2Q6UXX9 243 aaPredicted RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 MICAL1Q8TDZ2 1067 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 RIN2Q8WYP3 895 aaPredicted RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 TATDN2Q93075 761 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 VPS16Q9H269 839 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 PCDHB8Q9UN66 801 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 L1RE1Q9UN81 338 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.8■□□□□ 0.28
RB1-205ENST00000525036 SNX9Q9Y5X1 595 aa16.8■□□□□ 0.28
RB1-205ENST00000525036 SMTNL1A8MU46 457 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 ADAM12O43184 909 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 STX10O60499 249 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 CTSAP10619 480 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 PRKCSHP14314 528 aaPredicted RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 EEF1GP26641 437 aaKnown RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 MYL7Q01449 175 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 UBE3AQ05086 875 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 MAN2A1Q16706 1144 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 SOWAHAQ2M3V2 549 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 SV2CQ496J9 727 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 VWA3BQ502W6 1294 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 OSTM1Q86WC4 334 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 LMO3Q8TAP4 145 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 MRPL38Q96DV4 380 aaKnown RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 ENTPD7Q9NQZ7 604 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 LIMA1Q9UHB6 759 aaKnown RBP16.79■□□□□ 0.28
RB1-205ENST00000525036 COQ4Q9Y3A0 265 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
RB1-205ENST00000525036 BECN2A8MW95 431 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 PER2O15055 1255 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 IGFBP4P22692 258 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
RB1-205ENST00000525036 PNPLA4P41247 253 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 GLUD2P49448 558 aa16.78■□□□□ 0.28
RB1-205ENST00000525036 CDR1P51861 262 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms