RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
BEST1-204ENST00000524926 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
BEST1-204ENST00000524926 ITGA4P13612 1032 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 ASPAP45381 313 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 SREBF2Q12772 1141 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 LLGL2Q6P1M3 1020 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 IFT20Q8IY31 132 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 OSMRQ99650 979 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 ZSWIM1Q9BR11 485 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 WNT8AQ9H1J5 351 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 ADAMTS10Q9H324 1103 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 CDHR5Q9HBB8 845 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 CCDC188H7C350 402 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 RAD51CO43502 376 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 MARCKSL1P49006 195 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 PSEN2P49810 448 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
BEST1-204ENST00000524926 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 MON1BQ7L1V2 547 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 CATSPER4Q7RTX7 472 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
BEST1-204ENST00000524926 CPNE8Q86YQ8 564 aa16.29■□□□□ 0.2
BEST1-204ENST00000524926 DDX47Q9H0S4 455 aaKnown RBP16.29■□□□□ 0.2
BEST1-204ENST00000524926 AVENQ9NQS1 362 aaPredicted RBP16.29■□□□□ 0.2
BEST1-204ENST00000524926 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
BEST1-204ENST00000524926 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 ZSCAN5CA6NGD5 496 aaPredicted RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 SART1O43290 800 aaKnown RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 GPR32O75388 356 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 BRD2P25440 801 aaKnown RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 RAP1GAPP47736 663 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 RUFY4Q6ZNE9 571 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 IFT81Q8WYA0 676 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 NAP1L3Q99457 506 aaPredicted RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 ESYT3A0FGR9 886 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
BEST1-204ENST00000524926 AADACL2Q6P093 401 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 MMS22LQ6ZRQ5 1243 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 MROH7Q68CQ1 1323 aa16.28■□□□□ 0.2
BEST1-204ENST00000524926 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
BEST1-204ENST00000524926 MYO1FO00160 1098 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 NPTXRO95502 500 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 PEX5P50542 639 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 CDH8P55286 799 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 LACTBP83111 547 aaPredicted RBP16.27■□□□□ 0.2
BEST1-204ENST00000524926 HIC1Q14526 733 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
BEST1-204ENST00000524926 ZIC5Q96T25 663 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 TRIM7Q9C029 511 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 ST7Q9NRC1 585 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 PASKQ96RG2 1323 aa16.27■□□□□ 0.2
BEST1-204ENST00000524926 CCDC66A2RUB6 948 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 TREHO43280 583 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 CTGFP29279 349 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.19
BEST1-204ENST00000524926 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.19
BEST1-204ENST00000524926 GUCY2FP51841 1108 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.19
BEST1-204ENST00000524926 GPS2Q13227 327 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 PHF13Q86YI8 300 aaPredicted RBP16.27■□□□□ 0.19
BEST1-204ENST00000524926 AENQ8WTP8 325 aaKnown RBP16.27■□□□□ 0.19
BEST1-204ENST00000524926 CD101Q93033 1021 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 GDF3Q9NR23 364 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 AGAP1Q9UPQ3 857 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 Q9Y3F1 56 aa16.27■□□□□ 0.19
BEST1-204ENST00000524926 CD19P15391 556 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 CARSP49589 748 aaKnown RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 FSCN1Q16658 493 aaKnown RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 DCAF4L1Q3SXM0 396 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 SEL1L2Q5TEA6 688 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 PPP1R2P3Q6NXS1 205 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 MRPL47Q9HD33 250 aaKnown RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 NR2E1Q9Y466 385 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 PCDHA3Q9Y5H8 950 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 GOLGA6L10A0A0M3HER8 536 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 HAS3O00219 553 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 AKR1A1P14550 325 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 GRM5P41594 1212 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 CLUL1Q15846 466 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 SLC27A1Q6PCB7 646 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 SND1Q7KZF4 910 aaKnown RBP eCLIP16.26■□□□□ 0.19
BEST1-204ENST00000524926 APBB1IPQ7Z5R6 666 aaPredicted RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 C1orf131Q8NDD1 294 aaKnown RBP16.26■□□□□ 0.19
BEST1-204ENST00000524926 CCDC26Q8TAB7 109 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 TFAP2BQ92481 460 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 HPDLQ96IR7 371 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms