RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 CGRRF1Q99675 332 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 EDEM3Q9BZQ6 932 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 AGPAT3Q9NRZ7 376 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 ENC1O14682 589 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 TPD52P55327 224 aaPredicted RBP17.98■□□□□ 0.47
BEST1-203ENST00000524877 RASGRP2Q7LDG7 609 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 PCGF5Q86SE9 256 aa17.98■□□□□ 0.47
BEST1-203ENST00000524877 C17orf53Q8N3J3 647 aaPredicted RBP17.98■□□□□ 0.47
BEST1-203ENST00000524877 PAIP2BQ9ULR5 123 aaKnown RBP17.98■□□□□ 0.47
BEST1-203ENST00000524877 SLC2A3P11169 496 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 MYLK4Q86YV6 388 aaPredicted RBP17.97■□□□□ 0.47
BEST1-203ENST00000524877 ABCF3Q9NUQ8 709 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 ATICP31939 592 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 GTF2H1P32780 548 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 BCAR1P56945 870 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 GFPT1Q06210 699 aaPredicted RBP17.97■□□□□ 0.47
BEST1-203ENST00000524877 ANO4Q32M45 955 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 IL31Q6EBC2 164 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 HASPINQ8TF76 798 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 NFASCO94856 1347 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 GTF2H3Q13889 308 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 TTC23LQ6PF05 361 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 SLC7A14Q8TBB6 771 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 ITGA11Q9UKX5 1188 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 AP1G2O75843 785 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 MSH2P43246 934 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 FIBCD1Q8N539 461 aa17.97■□□□□ 0.47
BEST1-203ENST00000524877 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
BEST1-203ENST00000524877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.97■□□□□ 0.47
BEST1-203ENST00000524877 OPHN1O60890 802 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 CCL23P55773 120 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 SEZ6Q53EL9 994 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 WDR49Q8IV35 697 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 FAM50BQ9Y247 325 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 CDY2AQ9Y6F7 541 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 A0A0G2JLL6 359 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 MAPTP10636 758 aaKnown RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 CDH6P55285 790 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 ROR1Q01973 937 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 PPM1LQ5SGD2 360 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 NOL9Q5SY16 702 aaKnown RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 PRRT2Q7Z6L0 340 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 VSIG10LQ86VR7 867 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 ADAM2Q99965 735 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 MYL4P12829 197 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 PSMD7P51665 324 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 GUCY2DQ02846 1103 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 TRIP13Q15645 432 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 ZNF558Q96NG5 402 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 AVPR1AP37288 418 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 ETF1P62495 437 aaKnown RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 PTPAQ15257 358 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 AMHR2Q16671 573 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 KLC3Q6P597 504 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 ZNF677Q86XU0 584 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 CDK5RAP1Q96SZ6 601 aaKnown RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 THEGQ9P2T0 379 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 DOLKQ9UPQ8 538 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 CTNNB1P35222 781 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 STK4Q13043 487 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 PKN1Q16512 942 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 NXNQ6DKJ4 435 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 ANKRD42Q8N9B4 389 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 VPS39Q96JC1 886 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
BEST1-203ENST00000524877 MAF1Q9H063 256 aa17.96■□□□□ 0.47
BEST1-203ENST00000524877 FAM86B1E9PN63 330 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 POC1B-GALNT4F8VUJ3 575 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 FAM86B2P0C5J1 330 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 STX2P32856 288 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 SLC1A1P43005 524 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 NFE2Q16621 373 aaPredicted RBP17.95■□□□□ 0.46
BEST1-203ENST00000524877 CHSY1Q86X52 802 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 TRAPPC12Q8WVT3 735 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 COPS5Q92905 334 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
BEST1-203ENST00000524877 CYP4F11Q9HBI6 524 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 EEF2KO00418 725 aaKnown RBP17.95■□□□□ 0.46
BEST1-203ENST00000524877 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
BEST1-203ENST00000524877 MTMR12Q9C0I1 747 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 WNT8AQ9H1J5 351 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 FBXL21Q9UKT6 434 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 TXNDC9O14530 226 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 DR1Q01658 176 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 PDIK1LQ8N165 341 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 ATPAF2Q8N5M1 289 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 RMDN2Q96LZ7 410 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 KIAA1257Q9ULG3 409 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 PHRF1Q9P1Y6 1649 aaKnown RBP17.95■□□□□ 0.46
BEST1-203ENST00000524877 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 ATXN8OSP0DMR3 200 aa17.95■□□□□ 0.46
BEST1-203ENST00000524877 IFNAR2P48551 515 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms