RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ABHD15Q6UXT9 468 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 PPP1R21Q6ZMI0 780 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 TRMT1LQ7Z2T5 733 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 UBR7Q8N806 425 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 ANKRD42Q8N9B4 389 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 MGARPQ8TDB4 240 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 ASAP3Q8TDY4 903 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 C12orf42Q96LP6 360 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 NCAPGQ9BPX3 1015 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 MTFR1LQ9H019 292 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 AS3MTQ9HBK9 375 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 CD248Q9HCU0 757 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 DNAJC17Q9NVM6 304 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 EURLQ9NYK6 297 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 RBAKQ9NYW8 714 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 CTNNAL1Q9UBT7 734 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 TCP11X1B4DZS4 312 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 DNALI1O14645 258 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 MGRN1O60291 552 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 RGS20O76081 388 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 UBOX5O94941 541 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 GJB6O95452 261 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 LSM8O95777 96 aaKnown RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 LDHAP00338 332 aaKnown RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 CALB1P05937 261 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 BRAFP15056 766 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 CD58P19256 250 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 SLC8A1P32418 973 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 DSG3P32926 999 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 NR1H3Q13133 447 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 MAMLD1Q13495 774 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 LLGL1Q15334 1064 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 TMED2Q15363 201 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 KYNUQ16719 465 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 LRRC38Q5VT99 294 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 DCAF15Q66K64 600 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 SWSAP1Q6NVH7 229 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 DRICH1Q6PGQ1 229 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 SPATA21Q7Z572 469 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 PASD1Q8IV76 773 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 SCYL3Q8IZE3 742 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 GBP7Q8N8V2 638 aaPredicted RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 DEPTORQ8TB45 409 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 FEZF2Q8TBJ5 459 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 WNK4Q96J92 1243 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 MAGEB18Q96M61 343 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 TTC25Q96NG3 672 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 SLITRK1Q96PX8 696 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 MSTO1Q9BUK6 570 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 PORCNQ9H237 461 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 ACAD9Q9H845 621 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 NKIRAS1Q9NYS0 192 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 ARL2BPQ9Y2Y0 163 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 RIPK3Q9Y572 518 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 CD2APQ9Y5K6 639 aa9.46□□□□□ -0.9
PKP3-202ENST00000524646 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.9
PKP3-202ENST00000524646 MCM3APO60318 1980 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 LRRIQ4A6NIV6 560 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 ATP2A1O14983 1001 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 TLR3O15455 904 aaKnown RBP9.45□□□□□ -0.9
PKP3-202ENST00000524646 LIASO43766 372 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 ATP6V1G2O95670 118 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 CETPP11597 493 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 DPEP1P16444 411 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 GLRA2P23416 452 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 STX2P32856 288 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 ARL2P36404 184 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 RFC5P40937 340 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 AP3M2P53677 418 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 SP4Q02446 784 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
PKP3-202ENST00000524646 GRM1Q13255 1194 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 RIPK1Q13546 671 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 LRRC14Q15048 493 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 ZKSCAN8Q15776 578 aaPredicted RBP9.45□□□□□ -0.9
PKP3-202ENST00000524646 GALNTL6Q49A17 601 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 WLSQ5T9L3 541 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 DAB2IPQ5VWQ8 1189 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 ZNF772Q68DY9 489 aaPredicted RBP9.45□□□□□ -0.9
PKP3-202ENST00000524646 DNAJC24Q6P3W2 148 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 TMEM270Q6UE05 265 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 CRELD2Q6UXH1 353 aaPredicted RBP9.45□□□□□ -0.9
PKP3-202ENST00000524646 ARHGEF18Q6ZSZ5 1173 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 PHLDB2Q86SQ0 1253 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 TDRPQ86YL5 185 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 RCOR2Q8IZ40 523 aa9.45□□□□□ -0.9
PKP3-202ENST00000524646 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms