RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TMEM8AQ9HCN3 771 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 PLA2G2EQ9NZK7 142 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 SUCLA2Q9P2R7 463 aaPredicted RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 REXO2Q9Y3B8 237 aaKnown RBP7.63□□□□□ -1.19
VPS11-201ENST00000524454 INSL6Q9Y581 213 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 MYO9BQ13459 2157 aa7.63□□□□□ -1.19
VPS11-201ENST00000524454 ADGRA3Q8IWK6 1321 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 A0A0A6YYK5 440 aaPredicted RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 EFCAB8A8MWE9 144 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 HNRNPDLO14979 420 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 EPHB6O15197 1021 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 SLC16A4O15374 487 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 HOXA2O43364 376 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 EXTL3O43909 919 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 AKR1B10O60218 316 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 LPXNO60711 386 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 RPLP2P05387 115 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 SRGAP2CP0DJJ0 459 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 FGFR1P11362 822 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 DARSP14868 501 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 TMOD1P28289 359 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 STAT1P42224 750 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 CASP4P49662 377 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 KLK7P49862 253 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 MXI1P50539 228 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 POLR2FP61218 127 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 CDC42EP1Q00587 391 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 ITIH3Q06033 890 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 KLHL30Q0D2K2 578 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 TFDP1Q14186 410 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 ASIC2Q16515 512 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 IFI16Q16666 785 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 KYAT1Q16773 422 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 PTPN21Q16825 1174 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 WHAMMP3Q1A5X7 153 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 EPC2Q52LR7 807 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 CCDC122Q5T0U0 273 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 TCERG1LQ5VWI1 586 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 KRT39Q6A163 491 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 KIAA1328Q86T90 577 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 GPD1LQ8N335 351 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 CEP112Q8N8E3 955 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 RNF169Q8NCN4 708 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 PRPF31Q8WWY3 499 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 PSPC1Q8WXF1 523 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 FAXDC2Q96IV6 333 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 ALS2CR12Q96Q35 445 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 TGS1Q96RS0 853 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 NAPGQ99747 312 aaPredicted RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 DESI2Q9BSY9 194 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 FAM124BQ9H5Z6 455 aaPredicted RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 IL21Q9HBE4 155 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 POLD4Q9HCU8 107 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 SIX2Q9NPC8 291 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 CHD7Q9P2D1 2997 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 NENFQ9UMX5 172 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 JRKLQ9Y4A0 524 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 MRFAP1Q9Y605 127 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 MTCH2Q9Y6C9 303 aa7.62□□□□□ -1.19
VPS11-201ENST00000524454 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
VPS11-201ENST00000524454 CCDC169A6NNP5 214 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 F8VZ95 297 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CES2O00748 559 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 GPR182O15218 404 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CLIC2O15247 247 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 TACC1O75410 805 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 DGKIO75912 1065 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 GLRA2P23416 452 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 EIF4BP23588 611 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 ADSSP30520 456 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CTNNB1P35222 781 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 EIF4A3P38919 411 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 CYP2J2P51589 502 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 ERVK-21P61565 698 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 GCNT1Q02742 428 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CYP24A1Q07973 514 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 LAMTOR4Q0VGL1 99 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 RAPGEF1Q13905 1077 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 BTG3Q14201 252 aaPredicted RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 DSC3Q14574 896 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PSMD6Q15008 389 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 TCEAL1Q15170 157 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 SURF1Q15526 300 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 NAB2Q15742 525 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 FAM187BQ17R55 369 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PAPD7Q5XG87 772 aaKnown RBP7.61□□□□□ -1.19
VPS11-201ENST00000524454 IQCEQ6IPM2 695 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PPP1R2P3Q6NXS1 205 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 IRF2BP2Q7Z5L9 587 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 NPAS4Q8IUM7 802 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 ZBTB8OSQ8IWT0 167 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 CRIPAKQ8N1N5 446 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 FIBCD1Q8N539 461 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 ACRBPQ8NEB7 543 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 MNS1Q8NEH6 495 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 LMO3Q8TAP4 145 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 DEPTORQ8TB45 409 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
VPS11-201ENST00000524454 PARD3BQ8TEW8 1205 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms