RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TSHZ3Q63HK5 1081 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 LMBRD2Q68DH5 695 aaPredicted RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 USP37Q86T82 979 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 SRLQ86TD4 932 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 ZNF808Q8N4W9 903 aaPredicted RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 NUP133Q8WUM0 1156 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 SCAMP4Q969E2 229 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 CCDC138Q96M89 665 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 STRBPQ96SI9 672 aaKnown RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 ADOQ96SZ5 270 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 PNKPQ96T60 521 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 NAA15Q9BXJ9 866 aaKnown RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 CPEB1Q9BZB8 566 aaKnown RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 GOLGA2P5Q9HBQ8 144 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 KLHL11Q9NVR0 708 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 AFF4Q9UHB7 1163 aaKnown RBP4.8□□□□□ -1.64
SKP1-212ENST00000523966 CORO2BQ9UQ03 480 aa4.8□□□□□ -1.64
SKP1-212ENST00000523966 BTN3A1O00481 513 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 ERN1O75460 977 aaKnown RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 EN2P19622 333 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 SLC6A2P23975 617 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 FMO1Q01740 532 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 PRKD1Q15139 912 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 DPP9Q86TI2 863 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 COL23A1Q86Y22 540 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 MPP5Q8N3R9 675 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 PMM1Q92871 262 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 MRGPRX1Q96LB2 322 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 SMOQ99835 787 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 CNPPD1Q9BV87 410 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 UNKQ9C0B0 810 aaKnown RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 RNPEPQ9H4A4 650 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 CHST12Q9NRB3 414 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 AURKAIP1Q9NWT8 199 aaPredicted RBP4.79□□□□□ -1.64
SKP1-212ENST00000523966 ZSCAN32Q9NX65 697 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 CPNE7Q9UBL6 633 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 SLC45A2Q9UMX9 530 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 MED16Q9Y2X0 877 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 TMX2Q9Y320 296 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 PLEKHM1Q9Y4G2 1056 aa4.79□□□□□ -1.64
SKP1-212ENST00000523966 M0QYG6 137 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 MYO1FO00160 1098 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 TBX3O15119 743 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 UNC5CO95185 931 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 GRPP07492 148 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 XRCC6P12956 609 aaKnown RBP eCLIP4.78□□□□□ -1.64
SKP1-212ENST00000523966 SLC5A1P13866 664 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 SLC6A4P31645 630 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 PIK3CBP42338 1070 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 CTSWP56202 376 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 RNASE9P60153 205 aaKnown RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 BTKQ06187 659 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 SLC13A2Q13183 592 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 SPTY2D1Q68D10 685 aaPredicted RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 NAIF1Q69YI7 327 aaPredicted RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 ZNF585AQ6P3V2 769 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 MAMDC4Q6UXC1 1216 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 MORC1Q86VD1 984 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 DNERQ8NFT8 737 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 IPCEF1Q8WWN9 437 aaPredicted RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 EDAQ92838 391 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 GJA10Q969M2 543 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 POLR3GLQ9BT43 218 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 TRIM54Q9BYV2 358 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 GPR35Q9HC97 309 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 SERHLQ9NQF3 203 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 RNF181Q9P0P0 153 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
SKP1-212ENST00000523966 MTO1Q9Y2Z2 717 aaKnown RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 USP15Q9Y4E8 981 aaPredicted RBP4.78□□□□□ -1.64
SKP1-212ENST00000523966 POLRMTO00411 1230 aaKnown RBP4.77□□□□□ -1.65
SKP1-212ENST00000523966 KPNA5O15131 536 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
SKP1-212ENST00000523966 IL18RAPO95256 599 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 PARP1P09874 1014 aaKnown RBP4.77□□□□□ -1.65
SKP1-212ENST00000523966 GCSHP23434 173 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 APOBEC3AP31941 199 aaPredicted RBP4.77□□□□□ -1.65
SKP1-212ENST00000523966 SELENOPP49908 381 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 RABGGTBP53611 331 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 JAG1P78504 1218 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 MORC3Q14149 939 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 ICAM4Q14773 271 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 SPDYE7PQ495Y7 208 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 LONRF3Q496Y0 759 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 LAYNQ6UX15 382 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 Q6ZRM9 215 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 RHOT2Q8IXI1 618 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 CCDC33Q8N5R6 958 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 SLC15A4Q8N697 577 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 DNAJC5GQ8N7S2 189 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 TMIEQ8NEW7 156 aa4.77□□□□□ -1.65
SKP1-212ENST00000523966 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms