RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TMEM59LQ9UK28 342 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 PADI3Q9ULW8 664 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 DUSP12Q9UNI6 340 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 PCDHB12Q9Y5F1 795 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 MYH6P13533 1939 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 NRCAMQ92823 1304 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 FSD2A1L4K1 749 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 PRAMEF27A3QJZ7 478 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 TBKBP1A7MCY6 615 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 CLASP2O75122 1294 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 STAG3L1P0CL83 205 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 SRGAP2BP0DMP2 458 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 TGFB3P10600 412 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 TGM1P22735 817 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 HOXA13P31271 388 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 PBX3P40426 434 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 MRPS6P82932 125 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 MRPS9P82933 396 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 ITIH3Q06033 890 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 RRP12Q5JTH9 1297 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 RARS2Q5T160 578 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 KIAA1841Q6NSI8 718 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 LETMD1Q6P1Q0 360 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 TAF2Q6P1X5 1199 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 LRFN4Q6PJG9 635 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 METTL7BQ6UX53 244 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 LRRC55Q6ZSA7 311 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 THNSL1Q8IYQ7 743 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 MRPS27Q92552 414 aaKnown RBP7.64□□□□□ -1.19
SDCBP-210ENST00000522843 CASP10Q92851 521 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 RELTQ969Z4 430 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 GAL3ST3Q96A11 431 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 COX4I2Q96KJ9 171 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 JMJD4Q9H9V9 463 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 ZBTB40Q9NUA8 1239 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 LZTS1Q9Y250 596 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 ZZEF1O43149 2961 aa7.64□□□□□ -1.19
SDCBP-210ENST00000522843 IGSF9BQ9UPX0 1349 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 C2orf71A6NGG8 1288 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 HPXP02790 462 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 DCNP07585 359 aaKnown RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 GLULP15104 373 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 IBSPP21815 317 aaPredicted RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 MTHFRP42898 656 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 KIR3DL1P43629 444 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 SARSP49591 514 aaKnown RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 HK2P52789 917 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 TMEM62Q0P6H9 643 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 TDGQ13569 410 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 NKG7Q16617 165 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 TMEM266Q2M3C6 531 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 SLC35G1Q2M3R5 365 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 SPOUT1Q5T280 376 aaKnown RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 GPATCH4Q5T3I0 446 aaKnown RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 CES5AQ6NT32 575 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 TMPRSS7Q7RTY8 843 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 HDXQ7Z353 690 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 FTHL17Q9BXU8 183 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 ENTPD7Q9NQZ7 604 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 CYP26B1Q9NR63 512 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 TUBE1Q9UJT0 475 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 MRPL11Q9Y3B7 192 aaKnown RBP7.63□□□□□ -1.19
SDCBP-210ENST00000522843 COL4A3Q01955 1670 aa7.63□□□□□ -1.19
SDCBP-210ENST00000522843 FRMPD4Q14CM0 1322 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 CEP295Q9C0D2 2601 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 GSTTP1A0A1W2PQM5 241 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 C9IYK1 514 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 NOP56O00567 594 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 N4BP1O75113 896 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 LRRN2O75325 713 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 HMMRO75330 724 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 ESR1P03372 595 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 FGFR1P11362 822 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 EPCAMP16422 314 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 SP4Q02446 784 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 TNK2Q07912 1038 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 PPFIA1Q13136 1202 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 SPECC1Q5M775 1068 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 DNAJC14Q6Y2X3 702 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 HID1Q8IV36 788 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 MRPL43Q8N983 215 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 RSAD2Q8WXG1 361 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 PLPPR2Q96GM1 343 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 TTC14Q96N46 770 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 INPP4AQ96PE3 977 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 FAM49AQ9H0Q0 323 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 VAT1LQ9HCJ6 419 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 PARD6AQ9NPB6 346 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 NGRNQ9NPE2 291 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 TOMM22Q9NS69 142 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 DBR1Q9UK59 544 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 FBXL21Q9UKT6 434 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 ZNF215Q9UL58 517 aaPredicted RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 PCDHB5Q9Y5E4 795 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 TRPV2Q9Y5S1 764 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 SQORQ9Y6N5 450 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 CNOT1A5YKK6 2376 aaKnown RBP7.62□□□□□ -1.19
SDCBP-210ENST00000522843 C2orf16Q68DN1 1984 aa7.62□□□□□ -1.19
SDCBP-210ENST00000522843 SETXQ7Z333 2677 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms