RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 PHLDB3Q6NSJ2 640 aa27.56■■■□□ 2
NKX2-1-204ENST00000522719 C3orf58Q8NDZ4 430 aa27.56■■■□□ 2
NKX2-1-204ENST00000522719 APOBEC3GQ9HC16 384 aaKnown RBP27.56■■■□□ 2
NKX2-1-204ENST00000522719 AAASQ9NRG9 546 aa27.56■■■□□ 2
NKX2-1-204ENST00000522719 FAM207AQ9NSI2 230 aaPredicted RBP27.56■■■□□ 2
NKX2-1-204ENST00000522719 NUB1Q9Y5A7 615 aa27.56■■■□□ 2
NKX2-1-204ENST00000522719 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 TRIM21P19474 475 aaKnown RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 TBXAS1P24557 533 aaPredicted RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 AARSP49588 968 aaKnown RBP eCLIP27.55■■■□□ 2
NKX2-1-204ENST00000522719 GCNT1Q02742 428 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 LRMPQ12912 555 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 SPOPLQ6IQ16 392 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 TDHQ8IZJ6 230 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 RABGGTAQ92696 567 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 CLP1Q92989 425 aaKnown RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 TATDN2Q93075 761 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 NIF3L1Q9GZT8 377 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 PRG3Q9Y2Y8 225 aaPredicted RBP27.55■■■□□ 2
NKX2-1-204ENST00000522719 PCDHA11Q9Y5I1 949 aa27.55■■■□□ 2
NKX2-1-204ENST00000522719 NOL4O94818 638 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 KIF4AO95239 1232 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 UCHL3P15374 230 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 TNNC1P63316 161 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 KCNT2Q6UVM3 1135 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 CD300LGQ6UXG3 332 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 ENOSF1Q7L5Y1 443 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 PPM1KQ8N3J5 372 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 ZNF558Q96NG5 402 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 GANQ9H2C0 597 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.54■■■□□ 2
NKX2-1-204ENST00000522719 ADAM28Q9UKQ2 775 aa27.54■■■□□ 2
NKX2-1-204ENST00000522719 SPTLC1O15269 473 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 TRAPPC3O43617 180 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 TRIM14Q14142 442 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 SMYD5Q6GMV2 418 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 COLGALT1Q8NBJ5 622 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 JAKMIP2Q96AA8 810 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 EDEM3Q9BZQ6 932 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 FAM124BQ9H5Z6 455 aaPredicted RBP27.53■■■□□ 2
NKX2-1-204ENST00000522719 UBE2TQ9NPD8 197 aaPredicted RBP27.53■■■□□ 2
NKX2-1-204ENST00000522719 NXF1Q9UBU9 619 aaKnown RBP27.53■■■□□ 2
NKX2-1-204ENST00000522719 RWDD3Q9Y3V2 267 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 SNX9Q9Y5X1 595 aa27.53■■■□□ 2
NKX2-1-204ENST00000522719 ARHGEF37A1IGU5 675 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 TADA2AO75478 443 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 RABGGTBP53611 331 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 MFAP3P55082 362 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 APBA1Q02410 837 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 CUL2Q13617 745 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 FAM109BQ6ICB4 259 aaPredicted RBP27.52■■■□□ 2
NKX2-1-204ENST00000522719 DPH6Q7L8W6 267 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 TMC6Q7Z403 805 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 ARHGEF19Q8IW93 802 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 BCO2Q9BYV7 579 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 PRO3102Q9H379 93 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 CYP3A43Q9HB55 503 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 MARCH5Q9NX47 278 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 CEP72Q9P209 647 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 PCDHB12Q9Y5F1 795 aa27.52■■■□□ 2
NKX2-1-204ENST00000522719 GRXCR1A8MXD5 290 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 FAM163BP0C2L3 166 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 PPM1AP35813 382 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 ASPAP45381 313 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 TOP6BLQ8N6T0 577 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 ELMO3Q96BJ8 720 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 SUSD3Q96L08 255 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 SENP8Q96LD8 212 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 NAA15Q9BXJ9 866 aaKnown RBP27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 TTYH3Q9C0H2 523 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 DNAJC12Q9UKB3 198 aa27.51■■□□□ 1.99
NKX2-1-204ENST00000522719 A0A1W2PQJ5 194 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 M0QZQ0 153 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 EPHB6O15197 1021 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 HUS1O60921 280 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 ITGB1P05556 798 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 LINC00271P0C7V0 271 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 IGFBP6P24592 240 aaPredicted RBP27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 POLR2FP61218 127 aaKnown RBP27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 ELAVL2Q12926 359 aaKnown RBP27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 TIGD5Q53EQ6 642 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 IQCEQ6IPM2 695 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 DSTYKQ6XUX3 929 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 RRAGAQ7L523 313 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 DRC7Q8IY82 874 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 IGSF21Q96ID5 467 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 MMS19Q96T76 1030 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 POLIQ9UNA4 740 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 FHOD1Q9Y613 1164 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 LCHNA4D1U4 455 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 F8W810 466 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 CYB561D2O14569 222 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 YWHAEP62258 255 aaKnown RBP27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 GJB7Q6PEY0 223 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 CACNA2D4Q7Z3S7 1137 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 LIMS2Q7Z4I7 341 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 PPFIBP1Q86W92 1011 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 SLC39A11Q8N1S5 342 aa27.5■■□□□ 1.99
NKX2-1-204ENST00000522719 TTC39CQ8N584 583 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms