RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FAM189BP81408 668 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 KCNC3Q14003 757 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 KRT32Q14532 448 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 DSC3Q14574 896 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 LONRF3Q496Y0 759 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CLLU1OSQ5K130 101 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 LRCH2Q5VUJ6 765 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CBLL1Q75N03 491 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 DDX53Q86TM3 631 aaKnown RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC105Q8IYK2 499 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 HACE1Q8IYU2 909 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 DTWD2Q8NBA8 298 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 C2CD4AQ8NCU7 369 aaPredicted RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 EXOC6Q8TAG9 804 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 AUTS2Q8WXX7 1259 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 PHKBQ93100 1093 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC97Q96F63 343 aaPredicted RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 NLRP4Q96MN2 994 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC43Q96MW1 224 aaKnown RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 MAN1C1Q9NR34 630 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 DISC1Q9NRI5 854 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 LATS2Q9NRM7 1088 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 IGSF9Q9P2J2 1179 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CDH22Q9UJ99 828 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 TAF6LQ9Y6J9 622 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 FAM86B1E9PN63 330 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 MARCH6O60337 910 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 FZD6O60353 706 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 DKC1O60832 514 aaKnown RBP eCLIP6.97□□□□□ -1.29
PABPC1-220ENST00000522658 ERLIN2O94905 339 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 GLUD1P00367 558 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
PABPC1-220ENST00000522658 FAM86B2P0C5J1 330 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 ADMP35318 185 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 EHHADHQ08426 723 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 NCBP1Q09161 790 aaKnown RBP6.97□□□□□ -1.29
PABPC1-220ENST00000522658 LETM2Q2VYF4 491 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 CREB3L3Q68CJ9 461 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 CWF19L1Q69YN2 538 aaKnown RBP6.97□□□□□ -1.29
PABPC1-220ENST00000522658 C15orf39Q6ZRI6 1047 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 LRRC55Q6ZSA7 311 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 MIER3Q7Z3K6 550 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 ZNF410Q86VK4 478 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 SGMS1Q86VZ5 419 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 RHPN2Q8IUC4 686 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 EXOC8Q8IYI6 725 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 KIAA2013Q8IYS2 634 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 GIMAP7Q8NHV1 300 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 FBLIM1Q8WUP2 373 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 GATA6Q92908 595 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 IGSF21Q96ID5 467 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 OSBPL1AQ9BXW6 950 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 TRIM6Q9C030 488 aaPredicted RBP6.97□□□□□ -1.29
PABPC1-220ENST00000522658 SMOC2Q9H3U7 446 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 RSAD1Q9HA92 442 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 CHST12Q9NRB3 414 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 TBC1D13Q9NVG8 400 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 NCDNQ9UBB6 729 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 CA14Q9ULX7 337 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 ZDBF2Q9HCK1 2354 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 CLUHO75153 1309 aa6.97□□□□□ -1.29
PABPC1-220ENST00000522658 USP34Q70CQ2 3546 aa6.96□□□□□ -1.29
PABPC1-220ENST00000522658 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 METTL12A8MUP2 240 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 INPPL1O15357 1258 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 KINO60870 393 aaKnown RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 CYP3A4P08684 503 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 OR1G1P47890 313 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 CREMQ03060 361 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 SOX4Q06945 474 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 NFKBIBQ15653 356 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 PTPN14Q15678 1187 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 PFKFB3Q16875 520 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 GET4Q7L5D6 327 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 GPR149Q86SP6 731 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 RDM1Q8NG50 284 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 RIN2Q8WYP3 895 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 SMG7Q92540 1137 aaKnown RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 LPPQ93052 612 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 SHDQ96IW2 340 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 CCDC136Q96JN2 1154 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 ADAMTS10Q9H324 1103 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 TBC1D17Q9HA65 648 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 KCNK12Q9HB15 430 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 UBN1Q9NPG3 1134 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 SUCLA2Q9P2R7 463 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 PRG3Q9Y2Y8 225 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-220ENST00000522658 IRAK3Q9Y616 596 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms