RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DCAF16Q9NXF7 216 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 TRMT1Q9NXH9 659 aaKnown RBP4.46□□□□□ -1.7
SKP1-209ENST00000522552 TMEM5Q9Y2B1 443 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 HS3ST4Q9Y661 456 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 PIAS3Q9Y6X2 628 aa4.46□□□□□ -1.7
SKP1-209ENST00000522552 FAM90A27PA6NNH2 459 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 AGAP14A8MT82 685 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 H0Y3Z8 333 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GNB5O14775 395 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FOXP2O15409 715 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MTSS1O43312 755 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 SGTAO43765 313 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 BEST1O76090 585 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ZNF205O95201 554 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 C4BPAP04003 597 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 ALAS1P13196 640 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 DRD2P14416 443 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 TGM1P22735 817 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 NNMTP40261 264 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MSH2P43246 934 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KCNC1P48547 511 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 AARSP49588 968 aaKnown RBP eCLIP4.45□□□□□ -1.74e-6■■■■□ 24
SKP1-209ENST00000522552 POLE2P56282 527 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 UBASH3AP57075 661 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 DLG4P78352 724 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GALNT2Q10471 571 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CHAF1BQ13112 559 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ADAM15Q13444 863 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 TBCEQ15813 527 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 TTC38Q5R3I4 469 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 LRCH2Q5VUJ6 765 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ATG16L1Q676U5 607 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GALNT17Q6IS24 598 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KIAA1841Q6NSI8 718 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CNSTQ6PJW8 725 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 C20orf204Q6ZNR8 217 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 SZRD1Q7Z422 152 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 WFDC8Q8IUA0 241 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ARMC8Q8IUR7 673 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ZFPM1Q8IX07 1006 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CCDC170Q8IYT3 715 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 NUP93Q8N1F7 819 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 Q8N1Y9 231 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 SRBD1Q8N5C6 995 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 ZNF655Q8N720 491 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 DAGLBQ8NCG7 672 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GLB1L3Q8NCI6 653 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 UHMK1Q8TAS1 419 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 RUFY2Q8WXA3 655 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 N4BP2L2Q92802 583 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 TCTN2Q96GX1 697 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ZNF845Q96IR2 970 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 PI4K2AQ9BTU6 479 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 OSBPL6Q9BZF3 934 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 TWSG1Q9GZX9 223 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 EPB41L1Q9H4G0 881 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GTF3C4Q9UKN8 822 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 BLOC1S6Q9UL45 172 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KCNH3Q9ULD8 1083 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ACTL7BQ9Y614 415 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 IRS2Q9Y4H2 1338 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FAM229AH3BQW9 127 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FYB1O15117 783 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 COL8A1P27658 744 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ADSLP30566 484 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 AP2B1P63010 937 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CDC42EP1Q00587 391 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 SOX4Q06945 474 aaPredicted RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.45□□□□□ -1.7
SKP1-209ENST00000522552 NOMO1Q15155 1222 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 AOC3Q16853 763 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FLYWCH1Q4VC44 716 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PARP10Q53GL7 1025 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PRAMEF9Q5VWM5 478 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 NUTM2GQ5VZR2 741 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 TRIM68Q6AZZ1 485 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 GPR139Q6DWJ6 353 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ALKBH5Q6P6C2 394 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KCTD1Q719H9 257 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 THAP5Q7Z6K1 395 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PXKQ7Z7A4 578 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CPLX4Q7Z7G2 160 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MICU3Q86XE3 530 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 PPP1R3BQ86XI6 285 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 CILP2Q8IUL8 1156 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 VGLL2Q8N8G2 317 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 KBTBD7Q8WVZ9 684 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 RSAD2Q8WXG1 361 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FAM120BQ96EK7 910 aaKnown RBP4.45□□□□□ -1.7
SKP1-209ENST00000522552 CALML4Q96GE6 196 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 FEM1CQ96JP0 617 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MRGPRX4Q96LA9 322 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 MAGEB5Q9BZ81 275 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 ABHD16BQ9H3Z7 469 aa4.45□□□□□ -1.7
SKP1-209ENST00000522552 DEF6Q9H4E7 631 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms