RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PEAR1Q5VY43 1037 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 EFCAB12Q6NXP0 572 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 ARMCX6Q7L4S7 300 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 SYT12Q8IV01 421 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 GPIHBP1Q8IV16 184 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 FRMD1Q8N878 549 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 TTC9Q92623 222 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 PSMG3-AS1Q96PY0 264 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 FNBP1Q96RU3 617 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 TPSD1Q9BZJ3 242 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 RSAD1Q9HA92 442 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 PILRBQ9UKJ0 227 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 APOBEC2Q9Y235 224 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 ICE1Q9Y2F5 2266 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 VPS37CA5D8V6 355 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 KLRF2D3W0D1 207 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 JAK2O60674 1132 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 PFKFB2O60825 505 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 ATG13O75143 517 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 RNF40O75150 1001 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 MICAL2O94851 1124 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 APBB3O95704 486 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 MBD3O95983 291 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 EGFP01133 1207 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 ATXN1LP0C7T5 689 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 SKIP12755 728 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 GJA1P17302 382 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 PTPN2P17706 415 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 CXADRP78310 365 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 TNK2Q07912 1038 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 RAB33AQ14088 237 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 ALX1Q15699 326 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 ZNF574Q6ZN55 896 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 LRRC69Q6ZNQ3 347 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 HOMER1Q86YM7 354 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 TBC1D10CQ8IV04 446 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 NAXDQ8IW45 347 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 ZSCAN18Q8TBC5 510 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 DDX12PQ92771 950 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 EZH1Q92800 747 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 BRF1Q92994 677 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 GTF3C6Q969F1 213 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 TMEM209Q96SK2 561 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 KCNH7Q9NS40 1196 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 CACNG4Q9UBN1 327 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 MAD2L2Q9UI95 211 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 SLC6A14Q9UN76 642 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 PIN4Q9Y237 131 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 CSMD1Q96PZ7 3565 aa8.11□□□□□ -1.11
CTNNA1-227ENST00000521387 NFASCO94856 1347 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 HELZP42694 1942 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CLEC18AA5D8T8 446 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CTDNEP1O95476 244 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 FGAP02671 866 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 HMGB1P09429 215 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 ITPKAP23677 461 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 RAB27AP51159 221 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 DGKEP52429 567 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 HAND2P61296 217 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CREMQ03060 361 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 DNM1Q05193 864 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 SCRN1Q12765 414 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 USP39Q53GS9 565 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CLEC18BQ6UXF7 455 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 RASSF3Q86WH2 238 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CLEC18CQ8NCF0 446 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 GSTCDQ8NEC7 633 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 OLIG1Q8TAK6 271 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 PGBD4Q96DM1 585 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 GAD1Q99259 594 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 EPAS1Q99814 870 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 CORO1BQ9BR76 489 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 COLEC11Q9BWP8 271 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 AGXT2Q9BYV1 514 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 RIOX1Q9H6W3 641 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 ADAM28Q9UKQ2 775 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 PCOLCE2Q9UKZ9 415 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 NBASA2RRP1 2371 aa8.1□□□□□ -1.11
CTNNA1-227ENST00000521387 ZMYM6O95789 1325 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 NEDD4P46934 1319 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 NF1P21359 2839 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 A0A087WZ62 844 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ARHGEF37A1IGU5 675 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ANTXRLA6NF34 631 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 OTOL1A6NHN0 477 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 PIK3CDO00329 1044 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms