RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 C9orf57Q5W0N0 161 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 SCARA3Q6AZY7 606 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 GLB1LQ6UWU2 654 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 LIMS2Q7Z4I7 341 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 NPAS4Q8IUM7 802 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 ARHGEF19Q8IW93 802 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 SHC3Q92529 594 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 RABGGTAQ92696 567 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 LPPQ93052 612 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 DDX27Q96GQ7 796 aaKnown RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM84AQ96KN4 292 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 ZFP42Q96MM3 310 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 KREMEN1Q96MU8 473 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 UROC1Q96N76 676 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 RPS6KC1Q96S38 1066 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 CARD6Q9BX69 1037 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 BCO2Q9BYV7 579 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 IMPG2Q9BZV3 1241 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 GPR88Q9GZN0 384 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 MIOSQ9NXC5 875 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 TUBGCP4Q9UGJ1 667 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 DNAJC12Q9UKB3 198 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 NUB1Q9Y5A7 615 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 V9GYY5 206 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 TET1Q8NFU7 2136 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 TTC3P53804 2025 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 LTBP2Q14767 1821 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 SPDYE4A6NLX3 237 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 F8VZ95 297 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TMEM189-UBE2V1I3L0A0 370 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ITGB3P05106 788 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CSF2RAP15509 400 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ACO1P21399 889 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ANXA13P27216 316 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 POLR2BP30876 1174 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 STAT1P42224 750 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ASPAP45381 313 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 SCNN1GP51170 649 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 MFAP3P55082 362 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 MYL6P60660 151 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TUBB4BP68371 445 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 APBA1Q02410 837 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 SOX4Q06945 474 aaPredicted RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 PPIGQ13427 754 aaKnown RBP eCLIP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TUSC3Q13454 348 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CUL2Q13617 745 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 BMS1Q14692 1282 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 DRAP1Q14919 205 aaPredicted RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ARHGAP29Q52LW3 1261 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 NOMO2Q5JPE7 1267 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 GLRA4Q5JXX5 417 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 GJB7Q6PEY0 223 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 WDR59Q6PJI9 974 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CYP26C1Q6V0L0 522 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 C16orf59Q7L2K0 433 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CACNA2D4Q7Z3S7 1137 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM71AQ8IYT1 594 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 KRT222Q8N1A0 295 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TTC39CQ8N584 583 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 SPATA18Q8TC71 538 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 UBXN4Q92575 508 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TATDN2Q93075 761 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 TOP1MTQ969P6 601 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 C18orf25Q96B23 403 aaPredicted RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CASD1Q96PB1 797 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 DESI2Q9BSY9 194 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 UBXN6Q9BZV1 441 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 CYP3A43Q9HB55 503 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 UBE2TQ9NPD8 197 aaPredicted RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 PRDM5Q9NQX1 630 aaPredicted RBP8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 MYO1AQ9UBC5 1043 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 PRKAG2Q9UGJ0 569 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 AGAP1Q9UPQ3 857 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 PCDHB7Q9Y5E2 793 aa8.53□□□□□ -1.04
IGHV7-40-201ENST00000520963 ALPK3Q96L96 1907 aa8.52□□□□□ -1.04
IGHV7-40-201ENST00000520963 SSU72P8A0A1W2PR75 194 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 LRRC53A6NM62 1247 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 GFPT2O94808 682 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 CCDC172P0C7W6 258 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 P4HA1P13674 534 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 FERP16591 822 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 SOX5P35711 763 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 GUCY2FP51841 1108 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 ZNF132P52740 706 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 INCA1Q0VD86 236 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 MYO1EQ12965 1108 aa8.52□□□□□ -1.05
IGHV7-40-201ENST00000520963 UPP1Q16831 310 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms