RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ZNF529Q6P280 563 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 FOXR2Q6PJQ5 311 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 KSR2Q6VAB6 950 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 MAPKAPK5Q8IW41 473 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 BEND2Q8NDZ0 799 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.12□□□□□ -1.59
SQLE-204ENST00000520493 STON2Q8WXE9 905 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 COA7Q96BR5 231 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 C1GALT1C1Q96EU7 318 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 TAAR9Q96RI9 348 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 LDAHQ9H6V9 325 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 ZNHIT2Q9UHR6 403 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 MAP3K2Q9Y2U5 619 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 PIPSLA2A3N6 862 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 MARCH11A6NNE9 402 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 DTNBO60941 627 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 ERBB2P04626 1255 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 PROZP22891 400 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
SQLE-204ENST00000520493 PICALMQ13492 652 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 UBXN2BQ14CS0 331 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 SAFBQ15424 915 aaKnown RBP eCLIP5.11□□□□□ -1.59
SQLE-204ENST00000520493 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 TSHZ1Q6ZSZ6 1077 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 USP45Q70EL2 814 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 MIGA2Q7L4E1 593 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 CCHCR1Q8TD31 782 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 MAP3K14Q99558 947 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 RIOX1Q9H6W3 641 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 KLHL11Q9NVR0 708 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 TESQ9UGI8 421 aaKnown RBP5.11□□□□□ -1.59
SQLE-204ENST00000520493 USP25Q9UHP3 1055 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 TUBD1Q9UJT1 453 aa5.11□□□□□ -1.59
SQLE-204ENST00000520493 FRMPD2Q68DX3 1309 aaPredicted RBP5.11□□□□□ -1.59
SQLE-204ENST00000520493 A0A1B0GTW7 788 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 H3BML4 177 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 AP1G1O43747 822 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 CREB3O43889 395 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 SPDEFO95238 335 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 ZBED1O96006 694 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 NBPF7P0C2Y1 421 aaPredicted RBP5.1□□□□□ -1.59
SQLE-204ENST00000520493 ITGAMP11215 1152 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 PDCP20941 246 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 COL10A1Q03692 680 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 MORC3Q14149 939 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 GRM3Q14832 879 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 SYCP2LQ5T4T6 812 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 METRNLQ641Q3 311 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 PNPLA7Q6ZV29 1317 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 SEM1Q6ZVN7 128 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 CATIPQ7Z7H3 387 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 TMEM132CQ8N3T6 1108 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 DIS3LQ8TF46 1054 aaKnown RBP5.1□□□□□ -1.59
SQLE-204ENST00000520493 SLC9A6Q92581 669 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 RNF31Q96EP0 1072 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 NEU1Q99519 415 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 ALOXE3Q9BYJ1 711 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 FAM204AQ9H8W3 233 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 DKK2Q9UBU2 259 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 ACTL7AQ9Y615 435 aa5.1□□□□□ -1.59
SQLE-204ENST00000520493 COL4A3Q01955 1670 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 ZAR1LA6NP61 321 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 ERN1O75460 977 aaKnown RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 GPANK1O95872 356 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 GCSHP23434 173 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 ADRA1BP35368 520 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 KIF23Q02241 960 aaPredicted RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 SEPT2Q15019 361 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 RHOT1Q8IXI2 618 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 FAM9AQ8IZU1 332 aaPredicted RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 FITM2Q8N6M3 262 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 PPM1NQ8N819 430 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 NLGN4YQ8NFZ3 816 aaPredicted RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 GPR150Q8NGU9 434 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 MVB12AQ96EY5 273 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 LRGUKQ96M69 825 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 SLC2A13Q96QE2 648 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 ADAM2Q99965 735 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 TMEM60Q9H2L4 133 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 GALNT9Q9HCQ5 603 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 TBCCD1Q9NVR7 557 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 KCNE5Q9UJ90 142 aa5.09□□□□□ -1.59
SQLE-204ENST00000520493 RUVBL1Q9Y265 456 aaKnown RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 MTO1Q9Y2Z2 717 aaKnown RBP5.09□□□□□ -1.59
SQLE-204ENST00000520493 MYBBP1AQ9BQG0 1328 aaKnown RBP5.08□□□□□ -1.6
SQLE-204ENST00000520493 FAM227AF5H4B4 570 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 TUSC2O75896 110 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 RPLP2P05387 115 aaKnown RBP5.08□□□□□ -1.6
SQLE-204ENST00000520493 DDCP20711 480 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 FPR1P21462 350 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 FGFR4P22455 802 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 FDXRP22570 491 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 PCSK1P29120 753 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 HTR3AP46098 478 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 SLC6A9P48067 706 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 408.4 ms