RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TNNC1P63316 161 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TFAMQ00059 246 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MYL7Q01449 175 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TSPY1Q01534 308 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SPAG1Q07617 926 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 ADAM9Q13443 819 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 BIRC3Q13489 604 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SNW1Q13573 536 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CAMK4Q16566 473 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CCDC40Q4G0X9 1142 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 ZC2HC1CQ53FD0 456 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 WDR44Q5JSH3 913 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CLLU1OSQ5K130 101 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 AGMOQ6ZNB7 445 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CCDC149Q6ZUS6 474 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 RTN4RL1Q86UN2 441 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 NELFCDQ8IXH7 590 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 FAM186BQ8IYM0 893 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 VPS52Q8N1B4 723 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SLC39A11Q8N1S5 342 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 KLHL23Q8NBE8 558 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SMG8Q8ND04 991 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MAFAQ8NHW3 353 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TMC2Q8TDI7 906 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 C2orf15Q8WU43 125 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 HDAC7Q8WUI4 952 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 LPPQ93052 612 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 IGSF21Q96ID5 467 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 NECTIN4Q96NY8 510 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 KCNK17Q96T54 332 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TTPALQ9BTX7 342 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 HERC2P3Q9BVR0 1158 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MFRPQ9BY79 579 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PLEKHA4Q9H4M7 779 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PRDM12Q9H4Q4 367 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TLE6Q9H808 572 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 RC3H2Q9HBD1 1191 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PSD3Q9NYI0 1048 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 KIAA1468Q9P260 1216 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 FEZ2Q9UHY8 353 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CPSF3Q9UKF6 684 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 YBX2Q9Y2T7 364 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PRG3Q9Y2Y8 225 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MKI67P46013 3256 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SCN5AQ14524 2016 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 TTC26A0AVF1 554 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 OR6C75A6NL08 312 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 BHMG1C9JSJ3 638 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 NRP1O14786 923 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 TNRC18O15417 2968 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 NRDCO43847 1150 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 GLUD1P00367 558 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 GALTP07902 379 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 FAM163BP0C2L3 166 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 DLATP10515 647 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 CTSAP10619 480 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 KLRC2P26717 231 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ERCC5P28715 1186 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 LRPAP1P30533 357 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 LHX1P48742 406 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ACOT2P49753 483 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 YWHAHQ04917 246 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ITIH3Q06033 890 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 EHHADHQ08426 723 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 DSC1Q08554 894 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 PNOCQ13519 176 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 VEPH1Q14D04 833 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 PSMD6Q15008 389 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 XKR4Q5GH76 650 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 TCERG1LQ5VWI1 586 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 SPATA1Q5VX52 437 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 FUT10Q6P4F1 479 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 TMCO3Q6UWJ1 677 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 C11orf57Q6ZUT1 292 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 EPM2AIP1Q7L775 607 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 DPH6Q7L8W6 267 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 DHX40Q8IX18 779 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 COLGALT2Q8IYK4 626 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 DCP1BQ8IZD4 617 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 CRIPAKQ8N1N5 446 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 CSGALNACT2Q8N6G5 542 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 LEMD2Q8NC56 503 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ENGASEQ8NFI3 743 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 SCFD1Q8WVM8 642 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ZNF592Q92610 1267 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 HLA-CQ95604 372 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 LRCH3Q96II8 777 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 RIPOR3Q96MK2 946 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 ZFP42Q96MM3 310 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 PPP1R10Q96QC0 940 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 GCNAQ96QF7 691 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 CDX2Q99626 313 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 CGRRF1Q99675 332 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 C17orf80Q9BSJ5 609 aa6.06□□□□□ -1.44
CTNNA1-220ENST00000520260 STRA6Q9BX79 667 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms