RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ITGB5P18084 799 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 NMT1P30419 496 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 CARSP49589 748 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 GALCP54803 685 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GYS2P54840 703 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 DRG2P55039 364 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 NCKAP1LP55160 1127 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 SNAP25P60880 206 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GTF2BQ00403 316 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 MAP2K1Q02750 393 aaPredicted RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 CYP4A11Q02928 519 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 KCNA1Q09470 495 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 RAD51AP2Q09MP3 1159 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 C19orf57Q0VDD7 668 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 BFSP1Q12934 665 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 IKQ13123 557 aaPredicted RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 RASA3Q14644 834 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 PLS1Q14651 629 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 DRAP1Q14919 205 aaPredicted RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 EPC2Q52LR7 807 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 TTMPQ5BVD1 217 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 PCNX4Q63HM2 1172 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 C11orf63Q6NUN7 778 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 KDM7AQ6ZMT4 941 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 INTS8Q75QN2 995 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 SRLQ86TD4 932 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 LDHDQ86WU2 507 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 RHOT2Q8IXI1 618 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 FAM178BQ8IXR5 827 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 C4orf19Q8IY42 314 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GSPT2Q8IYD1 628 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 MYCT1Q8N699 235 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 METTL13Q8N6R0 699 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 ANKRD13CQ8N6S4 541 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 WNT8BQ93098 351 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 MS4A14Q96JA4 679 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 DRC1Q96MC2 740 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 IWS1Q96ST2 819 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 OSMRQ99650 979 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 LXNQ9BS40 222 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 ZNF577Q9BSK1 485 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.45□□□□□ -1.54
SDC2-204ENST00000519914 TXLNGYQ9BZA5 131 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 INTS2Q9H0H0 1204 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 CARD9Q9H257 536 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 TAF1DQ9H5J8 278 aaPredicted RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 C17orf75Q9HAS0 396 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 AGO4Q9HCK5 861 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 ANKEF1Q9NU02 776 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 TBC1D22BQ9NU19 505 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GOLGA6AQ9NYA3 693 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 SMARCAL1Q9NZC9 954 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 EHD2Q9NZN4 543 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 APEX2Q9UBZ4 518 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 FRMD4BQ9Y2L6 1034 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 COQ4Q9Y3A0 265 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 NFS1Q9Y697 457 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GRIN2DO15399 1336 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 EP400Q96L91 3159 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ARHGEF35A5YM69 484 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ZNF233A6NK53 670 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 MIF4GDA9UHW6 222 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 HMGB1P1B2RPK0 211 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 CLIC2O15247 247 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 EIF3HO15372 352 aaKnown RBP eCLIP5.44□□□□□ -1.542e-9■■■■■ 41.7
SDC2-204ENST00000519914 HIP1RO75146 1068 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 GGPS1O95749 300 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CPP00450 1065 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CFBP00751 764 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 PDGFAP04085 211 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 GZMAP12544 262 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 PLS3P13797 630 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 SCP2P22307 547 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CHRNA5P30532 468 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CXCR5P32302 372 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 GTF2H1P32780 548 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ABCD1P33897 745 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 USP8P40818 1118 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 RARRES1P49788 294 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 JAK3P52333 1124 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 RTP1P59025 263 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 SLC7A5Q01650 507 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 GUCY2DQ02846 1103 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 MTMR3Q13615 1198 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 IKBKEQ14164 716 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 DLGAP5Q15398 846 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CBWD6Q4V339 395 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ZC2HC1CQ53FD0 456 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 DCAF17Q5H9S7 520 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 CBWD3Q5JTY5 395 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CBWD5Q5RIA9 395 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 C1orf220Q5T0J3 134 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 AGBL2Q5U5Z8 902 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 MAATS1Q7Z4T9 603 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 SPATS2Q86XZ4 545 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 TPH2Q8IWU9 490 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 SHISA5Q8N114 240 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms