RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 MATN3O15232 486 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 ANXA1P04083 346 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 HRGP04196 525 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 CFIP05156 583 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 SPATA31D3P0C874 917 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 RARBP10826 455 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 PSMC1P62191 440 aaKnown RBP7.75□□□□□ -1.17
PTPN12-213ENST00000519553 EXOSC9Q06265 439 aaKnown RBP7.75□□□□□ -1.17
PTPN12-213ENST00000519553 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 SPATA31D4Q6ZUB0 917 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 MAEAQ7L5Y9 396 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 MAPKAPK5Q8IW41 473 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 MRGPRX1Q96LB2 322 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 AKIP1Q9NQ31 210 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 GPRC5BQ9NZH0 403 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 CAPN8A6NHC0 703 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 ZNF785A8K8V0 405 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 RNASET2O00584 256 aaKnown RBP7.74□□□□□ -1.17
PTPN12-213ENST00000519553 KIF3BO15066 747 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 ZBED1O96006 694 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 PEX11BO96011 259 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 INSRRP14616 1297 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 HDCP19113 662 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 HSD11B2P80365 405 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 FNDC7Q5VTL7 733 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 B3GNTL1Q67FW5 361 aaPredicted RBP7.74□□□□□ -1.17
PTPN12-213ENST00000519553 SRGAP1Q7Z6B7 1085 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 PDPRQ8NCN5 879 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 FAM156AQ8NDB6 213 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 SCAMP4Q969E2 229 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 C22orf23Q9BZE7 217 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.74□□□□□ -1.17
PTPN12-213ENST00000519553 DKK2Q9UBU2 259 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 MYRFQ9Y2G1 1151 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 FPGT-TNNI3KV9GXZ4 949 aa7.74□□□□□ -1.17
PTPN12-213ENST00000519553 NPR1P16066 1061 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 RHCEP18577 417 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 TNFRSF1AP19438 455 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 GNALP38405 381 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 ZNF135P52742 658 aaPredicted RBP7.73□□□□□ -1.17
PTPN12-213ENST00000519553 SOX8P57073 446 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 GPSM2P81274 684 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 RHDQ02161 417 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 TUBA3CQ13748 450 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 CNN3Q15417 329 aaKnown RBP7.73□□□□□ -1.17
PTPN12-213ENST00000519553 CRB2Q5IJ48 1285 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 KHDC1LQ5JSQ8 128 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 TUBA3EQ6PEY2 450 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 RHOUQ7L0Q8 258 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 FAM43AQ8N2R8 423 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 AOPEPQ8N6M6 819 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 SLC17A8Q8NDX2 589 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 PNKPQ96T60 521 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 ADAM2Q99965 735 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 IMPG2Q9BZV3 1241 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 RSAD1Q9HA92 442 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 SARS2Q9NP81 518 aaKnown RBP7.73□□□□□ -1.17
PTPN12-213ENST00000519553 CPA4Q9UI42 421 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 AGAP1Q9UPQ3 857 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 CDYLQ9Y232 598 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 MAP3K2Q9Y2U5 619 aa7.73□□□□□ -1.17
PTPN12-213ENST00000519553 ZFPL1O95159 310 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 APOA5Q6Q788 366 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 Q8NA96 180 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 TINAGL1Q9GZM7 467 aaPredicted RBP7.72□□□□□ -1.17
PTPN12-213ENST00000519553 BHMT2Q9H2M3 363 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 MRPS18AQ9NVS2 196 aaKnown RBP7.72□□□□□ -1.17
PTPN12-213ENST00000519553 GEMIN8Q9NWZ8 242 aaKnown RBP7.72□□□□□ -1.17
PTPN12-213ENST00000519553 KCNE5Q9UJ90 142 aa7.72□□□□□ -1.17
PTPN12-213ENST00000519553 PHGDHO43175 533 aaKnown RBP7.71□□□□□ -1.18
PTPN12-213ENST00000519553 GPANK1O95872 356 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 TBX4P57082 545 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 TCF15Q12870 199 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 CFAP52Q8N1V2 620 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 TMEM132CQ8N3T6 1108 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 IL31RAQ8NI17 732 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 LENG9Q96B70 501 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 MYEOVQ96EZ4 313 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 VPS11Q9H270 941 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 DDX21Q9NR30 783 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPN12-213ENST00000519553 SLC2A4RGQ9NR83 387 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 CTTNBP2NLQ9P2B4 639 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 FZD1Q9UP38 647 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 MED16Q9Y2X0 877 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 HS3ST4Q9Y661 456 aa7.71□□□□□ -1.18
PTPN12-213ENST00000519553 A0A1W2PPL8 197 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 TMEM200CA6NKL6 621 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 DNAJB5O75953 348 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 ARFIP2P53365 341 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 HABP2Q14520 560 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-213ENST00000519553 ZXDCQ2QGD7 858 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-213ENST00000519553 LSM12Q3MHD2 195 aaKnown RBP7.7□□□□□ -1.18
PTPN12-213ENST00000519553 CCDC181Q5TID7 509 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 CCDC149Q6ZUS6 474 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 PPP1R32Q7Z5V6 425 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 CPEB3Q8NE35 698 aaKnown RBP7.7□□□□□ -1.18
PTPN12-213ENST00000519553 ZNF483Q8TF39 744 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms