RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 EXOC7Q9UPT5 735 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 DERAQ9Y315 318 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 C5orf42Q9H799 3197 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 ARHGEF37A1IGU5 675 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 GOLGA8IPA6NC78 632 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 GOLGA8JA6NMD2 632 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 XPOTO43592 962 aaKnown RBP10.13□□□□□ -0.79
HDAC3-215ENST00000519474 LDHAP00338 332 aaKnown RBP10.13□□□□□ -0.79
HDAC3-215ENST00000519474 PDGFBP01127 241 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-215ENST00000519474 POU2F2P09086 479 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 GARTP22102 1010 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 FSHRP23945 695 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 AVPR2P30518 371 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 ME1P48163 572 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 EHHADHQ08426 723 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 TDGQ13569 410 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 ALCAMQ13740 583 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 IER5LQ5T953 404 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 TPGS2Q68CL5 300 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 DSTYKQ6XUX3 929 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 TCEAL8Q8IYN2 117 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 SYCP3Q8IZU3 236 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 ST13P5Q8NFI4 369 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-215ENST00000519474 ITFG1Q8TB96 612 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 SENP8Q96LD8 212 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 CBWD1Q9BRT8 395 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 RPP25Q9BUL9 199 aaKnown RBP10.13□□□□□ -0.79
HDAC3-215ENST00000519474 PCIF1Q9H4Z3 704 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 DPP3Q9NY33 737 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 IGSF9Q9P2J2 1179 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 SERTAD1Q9UHV2 236 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 C2CD2Q9Y426 696 aa10.13□□□□□ -0.79
HDAC3-215ENST00000519474 ANHXE9PGG2 379 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 EXTL3O43909 919 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 VNN2O95498 520 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 PTPN2P17706 415 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 TYMPP19971 482 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 PAX3P23760 479 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 ELF1P32519 619 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 AFMP43652 599 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 YWHAHQ04917 246 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-215ENST00000519474 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 MTMR3Q13615 1198 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 LIN9Q5TKA1 542 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 EPM2AIP1Q7L775 607 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-215ENST00000519474 EFCAB13Q8IY85 973 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 CXorf38Q8TB03 319 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 LEO1Q8WVC0 666 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-215ENST00000519474 SECISBP2LQ93073 1101 aaKnown RBP10.12□□□□□ -0.79
HDAC3-215ENST00000519474 NXPE3Q969Y0 559 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 SAAL1Q96ER3 474 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 TMEM209Q96SK2 561 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 BLZF1Q9H2G9 400 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 TMEM206Q9H813 350 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 AFF4Q9UHB7 1163 aaKnown RBP10.12□□□□□ -0.79
HDAC3-215ENST00000519474 CDH7Q9ULB5 785 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 BDP1A6H8Y1 2624 aa10.12□□□□□ -0.79
HDAC3-215ENST00000519474 NOTCH4Q99466 2003 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 PVALEFA0A1B0GWK0 134 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 CYB561D2O14569 222 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 NARSO43776 548 aaKnown RBP10.11□□□□□ -0.79
HDAC3-215ENST00000519474 KLRC4O43908 158 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 XYLBO75191 536 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 IL18RAPO95256 599 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 CYP11A1P05108 521 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 RHOP08100 348 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 OR4Q2P0C623 313 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 SLFN14P0C7P3 912 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 CMA1P23946 247 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 ASIC1P78348 528 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 GPR17Q13304 367 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 CUL4BQ13620 913 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 PARM1Q6UWI2 310 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 UNC13DQ70J99 1090 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 NT5DC4Q86YG4 428 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 FGF13Q92913 245 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 PAGE5Q96GU1 130 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 OXCT2Q9BYC2 517 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-215ENST00000519474 PDE11AQ9HCR9 933 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-215ENST00000519474 CEP72Q9P209 647 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 MAFFQ9ULX9 164 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
HDAC3-215ENST00000519474 PDCD11Q14690 1871 aaKnown RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 A0A1B0GVL5 298 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 KPNA7A9QM74 516 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 PRRG1O14668 218 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 CLIC2O15247 247 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms