RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
SPIDR-209ENST00000519141 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CKBP12277 381 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CHRNB2P17787 502 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CD58P19256 250 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 WDR72Q3MJ13 1102 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 GLRA4Q5JXX5 417 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 ZNF677Q86XU0 584 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 UBR7Q8N806 425 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 ZMAT2Q96NC0 199 aaKnown RBP13.25□□□□□ -0.29
SPIDR-209ENST00000519141 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CRISPLD2Q9H0B8 497 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 OGDHLQ9ULD0 1010 aa13.25□□□□□ -0.29
SPIDR-209ENST00000519141 CTAGE9A4FU28 777 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 FANCGO15287 622 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TACC1O75410 805 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 MMEP08473 750 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 ITGA4P13612 1032 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 KCNE1P15382 129 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 RAB27AP51159 221 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 FMO1Q01740 532 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 MYO1EQ12965 1108 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 XKR4Q5GH76 650 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 PALB2Q86YC2 1186 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TMEM130Q8N3G9 435 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 NOX5Q96PH1 765 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 BCO2Q9BYV7 579 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TUBGCP4Q9UGJ1 667 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 MYH10P35580 1976 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 SCN1AP35498 2009 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 SMIM28A0A1B0GU29 152 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 BTNL10A8MVZ5 291 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 MOCS3O95396 460 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 CD4P01730 458 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 CAPN2P17655 700 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 GNA15P30679 374 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 ZNF132P52740 706 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TNNC1P63316 161 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
SPIDR-209ENST00000519141 CTNNBL1Q8WYA6 563 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 C18orf25Q96B23 403 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 NAPGQ99747 312 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
SPIDR-209ENST00000519141 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 RTN2O75298 545 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 URI1O94763 535 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-209ENST00000519141 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 GZMAP12544 262 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-209ENST00000519141 CDK7P50613 346 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 GALCP54803 685 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 DSC3Q14574 896 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
SPIDR-209ENST00000519141 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 LRRC52Q8N7C0 313 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 OSBPL7Q9BZF2 842 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 SMYD3Q9H7B4 428 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 CAPN6Q9Y6Q1 641 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 NCANO14594 1321 aa13.23□□□□□ -0.29
SPIDR-209ENST00000519141 A0A0A6YYK5 440 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-209ENST00000519141 ANKRD62A6NC57 917 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 THAP12O43422 761 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 BUB1O43683 1085 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 MGEA5O60502 916 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 CALCAP01258 141 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 CYP3A5P20815 502 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 ABCB4P21439 1286 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 BFSP2Q13515 415 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 TRAF7Q6Q0C0 670 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 DNAAF5Q86Y56 855 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 TTC39CQ8N584 583 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 ISCUQ9H1K1 167 aa13.22□□□□□ -0.29
SPIDR-209ENST00000519141 FAM124BQ9H5Z6 455 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-209ENST00000519141 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms