RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TRIM44Q96DX7 344 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 FBXL18Q96ME1 805 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 COLEC11Q9BWP8 271 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 XPO4Q9C0E2 1151 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 RYDENQ9NUL5 291 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 CNTN3Q9P232 1028 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 FBXL5Q9UKA1 691 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 AGO2Q9UKV8 859 aaKnown RBP8.21□□□□□ -1.1
SDCBP-206ENST00000519115 TSC2P49815 1807 aa8.21□□□□□ -1.1
SDCBP-206ENST00000519115 DOCK6Q96HP0 2047 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 A0A1W2PQJ5 194 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 TTC26A0AVF1 554 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CARNS1A5YM72 827 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GOLGA8IPA6NC78 632 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 C2orf71A6NGG8 1288 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GOLGA8JA6NMD2 632 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 LACTBL1A8MY62 500 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 H3BQ06 376 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 I3L4J1 428 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 STX10O60499 249 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CXCL14O95715 111 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GLP2RO95838 553 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 URODP06132 367 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 NFICP08651 508 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CTSAP10619 480 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 EPB41P11171 864 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 KCNE1P15382 129 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GTF2H1P32780 548 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PSEN1P49768 467 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 KCNQ1P51787 676 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CLCNKBP51801 687 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GUCY2FP51841 1108 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 COPB1P53618 953 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 STX17P56962 302 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 DLX2Q07687 328 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 TBX2Q13207 712 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PDAP1Q13442 181 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 ARID5BQ14865 1188 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PTPN14Q15678 1187 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CLUL1Q15846 466 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 VWA3BQ502W6 1294 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 XKR4Q5GH76 650 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 LLGL2Q6P1M3 1020 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 ARMCX5Q6P1M9 558 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 ALKAL1Q6UXT8 129 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 INTS8Q75QN2 995 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 DRC7Q8IY82 874 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC150Q8NCX0 1101 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC112Q8NEF3 446 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 VN1R2Q8NFZ6 395 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PABPC5Q96DU9 382 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 NAP1L5Q96NT1 182 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 TSPAN18Q96SJ8 248 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CBWD1Q9BRT8 395 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 HERC2P3Q9BVR0 1158 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 NDST4Q9H3R1 872 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 PCIF1Q9H4Z3 704 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 NGRNQ9NPE2 291 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 AGPAT3Q9NRZ7 376 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 KCND1Q9NSA2 647 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 SLC38A7Q9NVC3 462 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 TUBGCP4Q9UGJ1 667 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 ARMCX3Q9UH62 379 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 CPSF3Q9UKF6 684 aaKnown RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 ADAM28Q9UKQ2 775 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 MYO6Q9UM54 1294 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 BARX2Q9UMQ3 279 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-206ENST00000519115 MAPK8IP1Q9UQF2 711 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 FRMD4BQ9Y2L6 1034 aa8.2□□□□□ -1.1
SDCBP-206ENST00000519115 TTC28Q96AY4 2481 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 PODXLO00592 558 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 N4BP1O75113 896 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 TADA2AO75478 443 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 B3GAT3O94766 335 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 NR3C1P04150 777 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 SOD2P04179 222 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 TPM1P09493 284 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 NR2F2P24468 414 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 LTBRP36941 435 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 BRCC3P46736 316 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 GLUD2P49448 558 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 NDUFV1P49821 464 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 AP3M2P53677 418 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 WNT7BP56706 349 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 CLDN10P78369 228 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 MRPS5P82675 430 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 SURF1Q15526 300 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 DUSP6Q16828 381 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 CTC1Q2NKJ3 1217 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 FKBP15Q5T1M5 1219 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms