RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 LRRC3Q9BY71 257 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 SLITRK6Q9H5Y7 841 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 PHLPP2Q6ZVD8 1323 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 BTBD18B2RXH4 712 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 K7ERI5 159 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 DTNBO60941 627 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 EPN2O95208 641 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 SOX9P48436 509 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 PLD1Q13393 1074 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 SF3A2Q15428 464 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 RNF19BQ6ZMZ0 732 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 TMC8Q8IU68 726 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 C12orf50Q8NA57 414 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 DDX12PQ92771 950 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
TRAPPC9-204ENST00000518723 ASPMQ8IZT6 3477 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 A0A1W2PRU2 124 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 AXIN1O15169 862 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 MCF2P10911 925 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 CPB1P15086 417 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 PROZP22891 400 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 OSTNP61366 133 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 DIS3L2Q8IYB7 885 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 TBC1D32Q96NH3 1257 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 OXCT2Q9BYC2 517 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 DNAJC25Q9H1X3 360 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 ARRDC1-AS1Q9H2J1 176 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 TMEM134Q9H6X4 195 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 PCDHGA5Q9Y5G8 931 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 SPEGQ15772 3267 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 IGF2RP11717 2491 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 LAMA1P25391 3075 aa13.5□□□□□ -0.25
TRAPPC9-204ENST00000518723 ABLIM1O14639 778 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 MEFVO15553 781 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 AKAP3O75969 853 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 OAZ2O95190 189 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 VNN2O95498 520 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 PROS1P07225 676 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 WEE1P30291 646 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 MCM4P33991 863 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 PON2Q15165 354 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 PLA2G2CQ5R387 149 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 HAUS6Q7Z4H7 955 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 LRRC3BQ96PB8 259 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 LSM14BQ9BX40 385 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 POLD4Q9HCU8 107 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 RXFP3Q9NSD7 469 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 ARHGAP28Q9P2N2 729 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 ASB3Q9Y575 518 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 RALGAPA1Q6GYQ0 2036 aa13.49□□□□□ -0.25
TRAPPC9-204ENST00000518723 M0QZQ0 153 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 RPP40O75818 363 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 KCNK5O95279 499 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 HOXC13P31276 330 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 MCM7P33993 719 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 NPTX2P47972 431 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 EPHB3P54753 998 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 YWHAHQ04917 246 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 ORC2Q13416 577 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 STXBP5Q5T5C0 1151 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 TAS1R3Q7RTX0 852 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 RALYQ9UKM9 306 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 GREB1Q4ZG55 1949 aa13.48□□□□□ -0.25
TRAPPC9-204ENST00000518723 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 CCDC169A6NNP5 214 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 DPYSL4O14531 572 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 EXTL3O43909 919 aa13.47□□□□□ -0.25
TRAPPC9-204ENST00000518723 FGF19O95750 216 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms