RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 PIRO00625 290 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ENPP3O14638 875 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 OFD1O75665 1012 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 GFPT2O94808 682 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 CLSTN1O94985 981 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 SERPING1P05155 500 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 THP07101 528 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 FERP16591 822 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 TBXAS1P24557 533 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 MAGEA10P43363 369 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ASPAP45381 313 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ARID5AQ03989 594 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 GRIK3Q13003 919 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ZNF667Q5HYK9 610 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 CLLU1OSQ5K130 101 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 C9orf57Q5W0N0 161 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 CNKSR3Q6P9H4 555 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 SCARA5Q6ZMJ2 495 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 FAM71AQ8IYT1 594 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 LRRC52Q8N7C0 313 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 GDF15Q99988 308 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 BCO2Q9BYV7 579 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 UBE2OQ9C0C9 1292 aaKnown RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 ELAC1Q9H777 363 aaKnown RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 UBN1Q9NPG3 1134 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 PRDM5Q9NQX1 630 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-203ENST00000517921 TMEM161AQ9NX61 479 aa11.35□□□□□ -0.59
PABPC1-203ENST00000517921 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 RAG1P15918 1043 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 BMP8BP34820 402 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
PABPC1-203ENST00000517921 KLHL30Q0D2K2 578 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 TDRD12Q587J7 1177 aaKnown RBP11.34□□□□□ -0.59
PABPC1-203ENST00000517921 TOGARAM2Q6ZUX3 1019 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 KIAA1524Q8TCG1 905 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 JAKMIP2Q96AA8 810 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 ZNF560Q96MR9 790 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 SYT11Q9BT88 431 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 PRO3102Q9H379 93 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 HAUS4Q9H6D7 363 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 NHEJ1Q9H9Q4 299 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-203ENST00000517921 SLC38A7Q9NVC3 462 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 CACNG4Q9UBN1 327 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 INPP5FQ9Y2H2 1132 aa11.34□□□□□ -0.59
PABPC1-203ENST00000517921 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
PABPC1-203ENST00000517921 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-203ENST00000517921 POMCP01189 267 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 FGFR1P11362 822 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 CLCN1P35523 988 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 KIF11P52732 1056 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF132P52740 706 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-203ENST00000517921 WDR72Q3MJ13 1102 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 GLB1LQ6UWU2 654 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-203ENST00000517921 CCDC170Q8IYT3 715 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-203ENST00000517921 ACRBPQ8NEB7 543 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 SMYD3Q9H7B4 428 aa11.33□□□□□ -0.6
PABPC1-203ENST00000517921 NXF1Q9UBU9 619 aaKnown RBP11.33□□□□□ -0.6
PABPC1-203ENST00000517921 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
PABPC1-203ENST00000517921 PATJQ8NI35 1801 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CASTOR2A6NHX0 329 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 PODXLO00592 558 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 SPTLC1O15269 473 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CYP26A1O43174 497 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 B4GALT3O60512 393 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 NDUFA10O95299 355 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CCDC172P0C7W6 258 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 KRT5P13647 590 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 P4HA1P13674 534 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CSF2RAP15509 400 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 USP8P40818 1118 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 PNPLA4P41247 253 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 TAF6P49848 677 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 TNNC1P63316 161 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 PTK2Q05397 1052 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 TUSC3Q13454 348 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 SV2CQ496J9 727 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.64e-10■■■□□ 15.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms